| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3920 |
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| Symbol | |
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| ID | 3936401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4017152 |
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| End bp | 4017925 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637906298 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_511862 |
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| Protein GI | 89056411 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAT TGGTAACAGG GGCCGCCAAA CGGCTTGGTC GCGCGATGGC GCTGGAACTG
GCCGCGCAAG GTCATGACGT GGCGATCCAT TACAATGGCA GTGCCGATGC GGCGGAGGCC
ACGGCGGAGG AGGCCCGTGC CCTGGGTGTG AACGCCATCG CCCTGCAAGC GGACCTGTTG
GACGAGGACG CCGTGCAGGG CCTGATGCCC CGTGTCATTG AGGCGCTGGG ACCGGTGGAG
GTGCTGGTCA ACAGTGCCTC GGTCTTTGAC TACGACAACA TCGCATCGGC GACGCGCGCG
ACATGGGACG CCCACATGAT GTCCAACCTG CGCGCGCCCT TTGTGCTGAC CCAGGCGCTG
GCCGCGCAAT TGCCCGACCC GGACATCGAC GCGGGCGGAG AGCCTGTCGC ACGCGGCCTT
GTGGTGAATA TGGTCGACCA AAGGGTGCGC AAGCTGACAC CAGAGTTCAT GACCTACACG
ATTGCCAAAA TGGGTCTGTG GGCTTTTACG CAGACCGCCG CCCAGGGTCT CGCGCCGCGC
TGTCGCGTCA ACGCCATCGG CCCGGGTCCC ACAATGCAGG GCGCGCGCCA GTCGGCAGAG
CACTTCGCTG CACAGCGCGC GGCCACGGTT TTGGAACGCG GCGCCGGCCC GCAGGAGATT
GTGGAGGCGC TGCGATACTT TCTATCGGCA AAGGCGGTCA CGGGGCAGCT TTTGTGCGTG
GACGGGGGCC AACATCTGGT CTGGGAAACA CCGGACGTTT TGGGAGTGGA GTGA
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| Protein sequence | MAALVTGAAK RLGRAMALEL AAQGHDVAIH YNGSADAAEA TAEEARALGV NAIALQADLL
DEDAVQGLMP RVIEALGPVE VLVNSASVFD YDNIASATRA TWDAHMMSNL RAPFVLTQAL
AAQLPDPDID AGGEPVARGL VVNMVDQRVR KLTPEFMTYT IAKMGLWAFT QTAAQGLAPR
CRVNAIGPGP TMQGARQSAE HFAAQRAATV LERGAGPQEI VEALRYFLSA KAVTGQLLCV
DGGQHLVWET PDVLGVE
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