| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3919 |
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| Symbol | uvrC |
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| ID | 3936400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4014964 |
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| End bp | 4016859 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906297 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_511861 |
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| Protein GI | 89056410 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATG AGACCGAAGC CGTCGCAGAT CAGCCGCCCA AAACGGGTCC CGTGAAGCCG
GGGCATGAGG TGATCGCGGA TTATGTCCGG ACGCTCGACA TGAGCCCCGG GGTCTACCGC
ATGCTCGATA GCCAGAGCCG GGTGCTCTAC GTTGGCAAGG CGCGCGCGTT GAAACGCCGG
GTTGCGAGCT ATGCGAAACC AAGCGGTCAC AGCCCCCGGA TCGCTCGGAT GATCCGCGAC
ACCGCCTCGA TGATGTTCCT GACCACGCGG ACGGAAACCG AGGCGCTTCT GCTGGAGCAG
AACCTGATCA AGCAGCTTAA GCCCAAGTTC AATGTGCTGC TGCGTGATGA CAAGAGCTTC
CCGAATATTC TGGTCAGCGA CGAACACGCC TTTCCCCAGA TCAAGAAGCA TCGCGGATCG
AAGAAAGAGA AGGGAAGCTA CTTCGGTCCC TTCGCCAGCG CAGGCGCAGT GAACCGCACC
CTGAACCAGT TGCAAAAGGT ATTTCTGCTG CGAAATTGCA CGGATGCGGT GTTCGAGTCC
CGCACGCGGC CCTGTCTGCT GTATCAGATC AAGCGGTGCA GTGGGCCCTG CGTGGGCCAC
ATCAGCGAAG AGGATTACGG GGCGTCGGTC AAAGATGCCG TGCGGTTTTT GAAGGGCGAC
AGCACCGATC TTCAACGGCA GCTGGCCGAC GGTATGGCGG CGGCGTCCGA GGCGATGGAG
TTTGAACGCG CCGCGGCCCT GCGCGACCGC ATCCGTGCGC TGACCAACGT GCAAAGCGCC
CAAGGCATCA ACCCGCAAGG CGTGAAAGAG GCCGACGTGA TTGCCCTGCA TATGGAAGGC
GGACAGGCCT GCGTGCAGGT CTTCTTCATC CGCGCCAACC AGAATTGGGG CAACCGCGAT
TTCTACCCGC GCGTTGGCGC AGACATCGAG GAGCCTGAGG TGCTGGAGGC GTTCCTGGGC
CAGTTCTATG ACCAGAAAGA ACCGCCAAAG CAGCTTCTTT TGTCCCATCC CGTGGAAAGC
ATGGACCTGA TGGTGGACGC GTTGTCCGGC AAACGCGGCA CCAAGGTCGA AATCCTGGTG
CCGCAGCGCG GCGAGAAGGC AGAGCTTGTG GACGGCGCGC GGCGCAATGC GCGCGAAAGT
CTGGGCCGCA AGATGGCGGA GACGCAGGCC CAGGGCAAAC TTCTGGATGG GCTGGCCGGG
GCCTTCGGGC TGGACGGCCC GCCGAAGCGC GTTGAGGTCT ACGACAACTC CCACATCCAA
GGGGCCCATG CGGTGGGCGC GATGATCGTC GCGGGGCCGG AGGGGTATCT GAAGAGCCAG
TACCGCAAGT TCAACATCAA GGGCGGCAGC CTGACCCCGG GCGATGATTT CGGGATGATG
AAAGAGGTGC TGACACGCCG GTTCGCGCGC CTTTTGAAGG AAGACCCGGA CCGGGAGACC
GAGGCCTGGC CGGACCTGCT GTTGATTGAC GGCGGCGCGG GTCAAATCTC AGCGGTGAAG
GAAATCATGG ACGATCTGGG CGTCGACGAC GTGCCGTTCA TTGGCGTCGC CAAGGGCATC
GACCGCGATC AGGGCAAGGA AGAATTCTAC CGCCCCGGCC AGCCCGTCTT TGCGTTGAAG
CGCAACGATC CGGTCCTGTA TTTCGTGCAG CGGATGCGCG ATGAGGCGCA CCGGTTCGCT
ATCGGGGCCC ACCGGGCGAA GCGATCCAAG GCCGTGTCGG CCACGCCGCT GGATGATGTG
CCGGGCGTTG GCGCGGGGCG CAAACGGGCG CTGTTGGCGC ATTTTGGTAG TGCAAAGGCG
GTCGCGCGCG CCAATCTGTC GGATCTGACG GCGGTGGATG GCGTCAGCGA GGGTTTGGCC
CAGAAGATCT ACGACTTCTT CCACGATCAG GCGTGA
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| Protein sequence | MKNETEAVAD QPPKTGPVKP GHEVIADYVR TLDMSPGVYR MLDSQSRVLY VGKARALKRR
VASYAKPSGH SPRIARMIRD TASMMFLTTR TETEALLLEQ NLIKQLKPKF NVLLRDDKSF
PNILVSDEHA FPQIKKHRGS KKEKGSYFGP FASAGAVNRT LNQLQKVFLL RNCTDAVFES
RTRPCLLYQI KRCSGPCVGH ISEEDYGASV KDAVRFLKGD STDLQRQLAD GMAAASEAME
FERAAALRDR IRALTNVQSA QGINPQGVKE ADVIALHMEG GQACVQVFFI RANQNWGNRD
FYPRVGADIE EPEVLEAFLG QFYDQKEPPK QLLLSHPVES MDLMVDALSG KRGTKVEILV
PQRGEKAELV DGARRNARES LGRKMAETQA QGKLLDGLAG AFGLDGPPKR VEVYDNSHIQ
GAHAVGAMIV AGPEGYLKSQ YRKFNIKGGS LTPGDDFGMM KEVLTRRFAR LLKEDPDRET
EAWPDLLLID GGAGQISAVK EIMDDLGVDD VPFIGVAKGI DRDQGKEEFY RPGQPVFALK
RNDPVLYFVQ RMRDEAHRFA IGAHRAKRSK AVSATPLDDV PGVGAGRKRA LLAHFGSAKA
VARANLSDLT AVDGVSEGLA QKIYDFFHDQ A
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