| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3912 |
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| Symbol | |
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| ID | 3936393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4009202 |
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| End bp | 4009939 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637906290 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_511854 |
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| Protein GI | 89056403 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGC GTCCCAAGAT CCGCCTCTTT GTAGATCACC CCCTGGGGGA GGCGCAAAGC
GTTCCCGTGT CGCGGGACCA TGCGAACTAC CTGTTCAACG TGATGCGTCT TGATGCGGGC
GCGGGCGTGG CGCTGTTTAA CGGCACGGAT GGGGAATGGC GGGCAGAGGT GGCCGCGAAG
GGCAAACGCG GAGGGGTGCT TGTTTGCAAG GAACAAACGG CACCACAGGT GATGCCGCCC
GATATGTGGC TGTTGTTCGC GCCGATCAAG AAGGCGCGCA CGGATTTCAT CGTGGAGAAG
GCGGCGGAGC TGGGGGTGGC GCGTGTATGT CCGGTGCGGA CGGAGCGCAC GAACGCTGAG
CGGATCCGGC AGGACAAGTT GCAGGCCCAT GCGATGGAGG CGGCAGAGCA ATGCGGCGGG
ACCTACGTGC CGCCGGTTGA AGACATCAGA TCGTTGGAGA AGGTGCTGGA CGGGTGGGAC
GATCGCCGCG CCCTTGTCTT TGCAGATGAG GCGGAGGCCG GACGCTCCTC CAGCCTGGCG
GCTGTCCTCG CCGCGGCCCC GCCTCCGGCG GCTATCCTGA TCGGCCCGGA GGGTGGTTTC
TCGGACGCAG AGCGCGCGCG CTTGCGCGCA ATGCCCAACG TGCATGTGCT GTCGCTCGGT
CCTCGTATCC TGCGCGCCGA TACCGCCGCT GTCGCGGCAT TGACCCTCTG GCAGGAACAT
GTCGGGGATT GGAGATGA
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| Protein sequence | MSQRPKIRLF VDHPLGEAQS VPVSRDHANY LFNVMRLDAG AGVALFNGTD GEWRAEVAAK
GKRGGVLVCK EQTAPQVMPP DMWLLFAPIK KARTDFIVEK AAELGVARVC PVRTERTNAE
RIRQDKLQAH AMEAAEQCGG TYVPPVEDIR SLEKVLDGWD DRRALVFADE AEAGRSSSLA
AVLAAAPPPA AILIGPEGGF SDAERARLRA MPNVHVLSLG PRILRADTAA VAALTLWQEH
VGDWR
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