Gene Jann_3906 details

Gene Information

• Locus tag: Jann_3906
• ID: 3936387
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 4004479
• End bp: 4005090
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637906284
• Product: acyl-phosphate glycerol-3-phosphate acyltransferase
• Protein accession: YP_511848
• Protein GI: 89056397
• COG category: [S] Function unknown
• COG ID: [COG0344] Predicted membrane protein
• TIGRFAM ID: [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.676022
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATCCCAC TGATTGAAAC CTCCGCACTT CTTCTGGGGC TGACGGCGCT GCTGGCCTAT 
CTGCTTGGGT CCGTGCCGTT TGGCATCATG ATGGCACGTC TCTTTGGGTT GGGGGATCTG 
CGCAGCGTCG GCTCGGGCAA CATCGGGGCC ACGAATGTTT TGCGCACCGG CAACAAGCTG 
GCGGCATTTC TGACCTTGGT GCTGGATGCC GGAAAAGGCG CGATCGCGGT ATTTTTGGCG 
CGCGCGCTGT TGGGCGAAGA TGCCGCACAA CTTGCGGGCT TCGCGGCGTT TCTGGGCCAC 
TGCTTCCCCG TGTTTCTGGG CTTTAAAGGC GGCAAAGGTG TGGCAACGTT CCTTGGCACG 
CTCTTGGCGC TCGCCTGGCC AATTGGGCTG GCCGCTTGTG CGATCTGGGC GATAACCGCG 
GCGGTCTTCC GGATGTCATC CCTCGCGGCT CTGGTCGCGG CGGCACTCAG CCCCTTGGCC 
GCGTTTACCC TGGGTCTGCC CTCGGCGGTG GTCTTCTGCG CCGCGCTGGC CACGCTGATC 
TTCCTTCGCC ACAGGGGGAA CATTTCCCGC ATCGCCAAGG GCCAGGAACC CAAGATTGGC 
AAGACATCCT GA 

 

Protein sequence

MIPLIETSAL LLGLTALLAY LLGSVPFGIM MARLFGLGDL RSVGSGNIGA TNVLRTGNKL 
AAFLTLVLDA GKGAIAVFLA RALLGEDAAQ LAGFAAFLGH CFPVFLGFKG GKGVATFLGT 
LLALAWPIGL AACAIWAITA AVFRMSSLAA LVAAALSPLA AFTLGLPSAV VFCAALATLI 
FLRHRGNISR IAKGQEPKIG KTS