Gene Jann_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3904 
Symbol 
ID3936385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4002658 
End bp4003167 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content63% 
IMG OID637906282 
Producthypothetical protein 
Protein accessionYP_511846 
Protein GI89056395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.291253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC TCCAAATCTT TGCGCTCAAC GAGCCCATTG ATGTCTCCCA TACCAACCTC 
ACCCGTCAGA CCGGCGAAAC ACCCGAACTA CCGCCCCTTG CAGAGTGGCT CGGCGTAGAT
ACGCTCGACA CCGATCAGAT CGAGCTGTTC CCAATCAAGG ACCTCAGCGA TATGCCGTTG
AGCGAATATA TTCGCCTCGC CTTCGCCCCG GAGGAGCAGA TTGCACCCGC CGACATAACC
CGGCTCGATG CGCTCTCGGG TGCGGTTCTT CTTGTCCCCG AAACGGCGCT CTCTGCCGCT
CCCAGACCCG GTTCGCAGGC GACGCTGATC GCCTCCGTTC CACTGGCACA GGCGGACAAC
TCGGGTTCAT TGCCCAAAGC AGATGTCGCG CCCGTGCCCT CAGCCGCGCC TGCCCCGGCG
GAGCCTGAAG CCCCACCGCC CATCGCCCTC TACGCGTTGA TTGGCATGGC GATCCTGGCC
GCCCTGATCT TCTTTGTGGG GTGGCGCTAG
 
Protein sequence
MTNLQIFALN EPIDVSHTNL TRQTGETPEL PPLAEWLGVD TLDTDQIELF PIKDLSDMPL 
SEYIRLAFAP EEQIAPADIT RLDALSGAVL LVPETALSAA PRPGSQATLI ASVPLAQADN
SGSLPKADVA PVPSAAPAPA EPEAPPPIAL YALIGMAILA ALIFFVGWR