Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3893 |
Symbol | |
ID | 3936374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3988756 |
End bp | 3989805 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637906271 |
Product | beta-lactamase-like |
Protein accession | YP_511835 |
Protein GI | 89056384 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.042904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA ATCGTGCCAT GACCAATCCC ATCCGCACTC CGTTCCCGGA TGCACCGACA GGGGGGACAG CCGTCGAGGT GGCCGAAAAC GTCCTCTGGT TGCGGGTCCC GCTGCCAATG GCGCTGGACC ACGTCAACGT CTATGCGCTG CGTGATGAGG ATGGCTGGAC CGTTGTGGAT ACCGGCGTGA ATTCTCGCCG CACGATTGCC TTGTGGGAAG AGATCCTCGC CGGTCCACTA CAAGGCGCGC CTGTGACGCG CTTGATCGTC ACGCACCATC ACCCCGATCA TGTGGGCCTT GCGGGCTGGT TCCAGGCGCG CGGTGCCGAG CTGCATATGA CGCGTACCGC ATGGTTGTTT TCGCGGATGT TGACGCTGGA TGAACAGGCT GAGGCGACCG ACGAACAGGT GCAATTCTGG ATCGACGCGG GCATGGATGC GGAGGTTCTG GCGACCCGCA AAGCGGAGCG GCCCTTCAAC TTCGCAGACA TCGTGTACCC GATGCCACTT GGGTTCACCC GCCTCCATGA AGGGCGCACG ATCCGGATGG GTGGACGTAT CTGGGATACC CGCTTCGGTC ACGGCCATGC GCCCGATCAC GCAACATTCT GGAGCCAGGA TGGGGATCTT GTGATCGGCG GGGACCAGCT GCTGGCGACG ATTTCTCCAA ACATCGGCGT CTACGCGACC GAGCCCGATG CGGACCCGTT GGGGGAGTGG ATGATGGCTT GCGAGGCCCT CCAACCCTTT GCGCGCGAAA GCCAACTGGT TCTGCCCGGC CATAAGCTGC CCTTCACCGG GCTGCCGTCG CGGATGCGTC AGTTGATCGA CAATCACCAC GGTGCGTTGT CGCGGTTACG CGATCACATC GCCCAAGGCC CGTGCAGCGC GGCGGAGTGC TTTCCACCGC TCTTCAAGCG CAAAATTGAC GATGGGACCT ATGGCCTCGC GCTCGTGGAG GCGGTGGCGC ATCTCAACCA CATGCATCAA CTGGGATATG TGACCCGTGC CCGCCGCGCC GACGGGGCCT GGGCCTACAG CCTCGCATAG
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Protein sequence | MTINRAMTNP IRTPFPDAPT GGTAVEVAEN VLWLRVPLPM ALDHVNVYAL RDEDGWTVVD TGVNSRRTIA LWEEILAGPL QGAPVTRLIV THHHPDHVGL AGWFQARGAE LHMTRTAWLF SRMLTLDEQA EATDEQVQFW IDAGMDAEVL ATRKAERPFN FADIVYPMPL GFTRLHEGRT IRMGGRIWDT RFGHGHAPDH ATFWSQDGDL VIGGDQLLAT ISPNIGVYAT EPDADPLGEW MMACEALQPF ARESQLVLPG HKLPFTGLPS RMRQLIDNHH GALSRLRDHI AQGPCSAAEC FPPLFKRKID DGTYGLALVE AVAHLNHMHQ LGYVTRARRA DGAWAYSLA
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