| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3892 |
|---|
| Symbol | |
|---|
| ID | 3936373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3987873 |
|---|
| End bp | 3988529 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637906270 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511834 |
|---|
| Protein GI | 89056383 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0400223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTATCGTG ATCATTGTCG GCCTGGCGCT GTTCGCGACA TGATGCGTGC GCTGCGGACG
TTGGCTGCGG GCCTTGTGGT GTTGTCTCTG GCCGGATGTA TGGGTGAAGA GGTTTGGGCA
CCGGATGATG CCGTGGCGCG GGCGACATTT GTGCCGCCCG GACCGCCGAC TGTGACCTTG
ATCACCTCGA TCAACACGGC CAACAATTCC GGCGCGCATT CTGCTTTGCT GATCGACGGC
GCGCAGCGCC TGTTGTTCGA CCCGGCAGGA AGCTGGCACA ACCCCGGCGT GCCCGAACGC
AACGACGTCC TGTTCGGCAT GAGCCCGGGC TATCTTGATC TGTATATGGC GTTCCAGTCC
AATGGCGTGT TCGAGGTGCG GACCCAGACA ATTGAGGTCT CCCCCGCTGT GGCACAGCAG
TTGAGCCAGG CCGTGCAGTC TTACGGGGCC GTGGGTCCGG CCTACTGTTC CCGGTCAATC
ACCGAGATCC TTGGTGCGAC ACCGGGGTTC ACGTCGATCC AGCGGACCTT CTACCCGATC
AACACGATGG GGCAGTTCGC GCAATTGCCC GGTGTTCAGC AATCCACGAT CATTGGCACA
ACCGGTGATG AAGAGAATGC CAGCGATGCG GTTCTGGCCG CTCAACTGGG CAACTAG
|
|---|
| Protein sequence | MYRDHCRPGA VRDMMRALRT LAAGLVVLSL AGCMGEEVWA PDDAVARATF VPPGPPTVTL
ITSINTANNS GAHSALLIDG AQRLLFDPAG SWHNPGVPER NDVLFGMSPG YLDLYMAFQS
NGVFEVRTQT IEVSPAVAQQ LSQAVQSYGA VGPAYCSRSI TEILGATPGF TSIQRTFYPI
NTMGQFAQLP GVQQSTIIGT TGDEENASDA VLAAQLGN
|
|---|
| |