Gene Jann_3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3885 
Symbol 
ID3936366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3982481 
End bp3982831 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content56% 
IMG OID637906263 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_511827 
Protein GI89056376 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.460728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0643134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA CTAAGATGAT GGCAGATGAG CCCGACAACG TCGACGGCGG AGATGGCGAC 
GTCTCGGTTG CCACAAAGAC CAAAACCAAG ACGCAGCGAC CGCCGATGTA TAAGGTGATG
CTGCTGAATG ACGATTATAC GCCGATGGAA TTCGTGGTCC ATGTGTTGGA GCGGTTCTTC
GGCATCACCC ACAGCCAGGC GGTTGAGATC ATGCTGGTCG TCCACAAGAA GGGCCTGGCC
GTTGTGGGTG TGTTCAGCCA CGAGATTGCG GAAACCAAGG TGGCACAGGT GATGGATTTC
GCCCGTCGCA ACCAACACCC CTTGCAATGC ACGATGGAGA AGGAGGAGTA A
 
Protein sequence
MTITKMMADE PDNVDGGDGD VSVATKTKTK TQRPPMYKVM LLNDDYTPME FVVHVLERFF 
GITHSQAVEI MLVVHKKGLA VVGVFSHEIA ETKVAQVMDF ARRNQHPLQC TMEKEE