Gene Jann_3882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3882 
Symbol 
ID3936363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3979995 
End bp3980582 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content63% 
IMG OID637906260 
Producthypothetical protein 
Protein accessionYP_511824 
Protein GI89056373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.116054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTA TTGCTGTCTT GCTCGCCCTG ACGGGCTTCA CGGGCCCCGC CTCGGCCCAG 
AATTCATCCT TTTGCCAGGA GCTATGGCTC AGCCGCAACA CGGTCATGGA CCGGGCGGGG
CAGTGCTTTG GAACACCGCT GGGGCAAGCC GTCTTCGACA ACTCGGATTG TGTGGAGGGC
GGTCTTCGTC TTACGCCGAT GGACGCGGAG ATCGTACGCT TGGCGCAACA GACGGAGGAT
TGGGCCAATT GTCAGGTGGA CACGCAGGCC GGTCAGCTAT CGGGTGATGT CGAGCCCTTC
CGCACCCGGC TAAGGGAGCT TGTTACGATC CCGGTTCGCG GAGATTCGGA GCATGGATGC
CGTGGCTACG GCGGGCCACC TGTCGCGCTT CACGCGGGTA CGTCCCCCAG CACGACCGTG
ATCGGCACCC TTGTCGCGGC TCAGGGATTC TCAGTCTCGC ACATCACAAT GCGCAGCGGG
TGGGAGTACC TGGAGGTCTA CGACCCAGAC GGCCCCGTCG TCGCGCACGG GTGGACCCGG
AATGATCTGG AAACCATGGT CGCCAGCTGC ACGTTCTTTG CAGGTTAG
 
Protein sequence
MIRIAVLLAL TGFTGPASAQ NSSFCQELWL SRNTVMDRAG QCFGTPLGQA VFDNSDCVEG 
GLRLTPMDAE IVRLAQQTED WANCQVDTQA GQLSGDVEPF RTRLRELVTI PVRGDSEHGC
RGYGGPPVAL HAGTSPSTTV IGTLVAAQGF SVSHITMRSG WEYLEVYDPD GPVVAHGWTR
NDLETMVASC TFFAG