Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3882 |
Symbol | |
ID | 3936363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3979995 |
End bp | 3980582 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637906260 |
Product | hypothetical protein |
Protein accession | YP_511824 |
Protein GI | 89056373 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.116054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTA TTGCTGTCTT GCTCGCCCTG ACGGGCTTCA CGGGCCCCGC CTCGGCCCAG AATTCATCCT TTTGCCAGGA GCTATGGCTC AGCCGCAACA CGGTCATGGA CCGGGCGGGG CAGTGCTTTG GAACACCGCT GGGGCAAGCC GTCTTCGACA ACTCGGATTG TGTGGAGGGC GGTCTTCGTC TTACGCCGAT GGACGCGGAG ATCGTACGCT TGGCGCAACA GACGGAGGAT TGGGCCAATT GTCAGGTGGA CACGCAGGCC GGTCAGCTAT CGGGTGATGT CGAGCCCTTC CGCACCCGGC TAAGGGAGCT TGTTACGATC CCGGTTCGCG GAGATTCGGA GCATGGATGC CGTGGCTACG GCGGGCCACC TGTCGCGCTT CACGCGGGTA CGTCCCCCAG CACGACCGTG ATCGGCACCC TTGTCGCGGC TCAGGGATTC TCAGTCTCGC ACATCACAAT GCGCAGCGGG TGGGAGTACC TGGAGGTCTA CGACCCAGAC GGCCCCGTCG TCGCGCACGG GTGGACCCGG AATGATCTGG AAACCATGGT CGCCAGCTGC ACGTTCTTTG CAGGTTAG
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Protein sequence | MIRIAVLLAL TGFTGPASAQ NSSFCQELWL SRNTVMDRAG QCFGTPLGQA VFDNSDCVEG GLRLTPMDAE IVRLAQQTED WANCQVDTQA GQLSGDVEPF RTRLRELVTI PVRGDSEHGC RGYGGPPVAL HAGTSPSTTV IGTLVAAQGF SVSHITMRSG WEYLEVYDPD GPVVAHGWTR NDLETMVASC TFFAG
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