Gene Jann_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3875 
Symbol 
ID3936356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3974363 
End bp3974767 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content60% 
IMG OID637906253 
Producthypothetical protein 
Protein accessionYP_511817 
Protein GI89056366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.808516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.287534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA TCCCCTTTTT CGCAGCTAGG CTAGATCGCA TGGGCAGCGA CAAGAACGAA 
ATGGCCAAGG ACCGCACGGA TTGGGCAGAG GATCGCACGA TCCTGGCCAA CGAGCGGACT
TTTGCGGGCT GGATGCGCAC CGGGATGGCC GCCGTCGCCA TAGCCCTTGG CCTGAAAGCG
GTTTTTGGTG AGTTTGAGCC GACATGGGCC GCGAAGGCGA CCTCCAGCGT GTTCATCGTA
TTGGCCTGCT ACATATTCTA CGCCGCCCGC CAACAGGCCT GCGCCACGCA ACAGCGGATG
GAACAGCACG ACGCAACGGC CAAATCTACC GGCTCGATGA CGGCAACGGC AATCATCCTG
GCCATCGGCT CCATTCTGAC CGGCGCGATT CTTTGGCTGC TGTAA
 
Protein sequence
MLDIPFFAAR LDRMGSDKNE MAKDRTDWAE DRTILANERT FAGWMRTGMA AVAIALGLKA 
VFGEFEPTWA AKATSSVFIV LACYIFYAAR QQACATQQRM EQHDATAKST GSMTATAIIL
AIGSILTGAI LWLL