| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3862 |
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| Symbol | |
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| ID | 3936342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3959382 |
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| End bp | 3960536 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637906240 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511804 |
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| Protein GI | 89056353 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.619546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCCT ATATCCTACG ACGTCTGTTG CTGATCATTC CGACCCTTCT CGGGGTGATG
ATGGTCAACT TCATCCTGAT CCAGTTCGTG CCGGGTGGAC CGATTGATCA GGTCATCGCT
CAGCTAGAAG GCGATGGGGA CGTCTTCGCC GGGATCTCTG GCGGCGGATC GGAGGCGATT
GGCGACGACA GTGATCTCGG CGGCGTCTCC CAAGGCGCGC GCGGGTTACC GCCGCAGTTT
CTGGAAAGCC TGCGGGTGGA ATTCAACTTC GCCCGTGTCG TCTGTGCGCC GGACTTCACA
GGAACGCCGG ATCTGGATGC TGACGAATGT TTCGCCGAGG ACATCCCGAT AGGCGAGCGT
TTCCTGCTGA TGATGGGCGA CTACCTGCGC TTTGATTTCG GCGAGAGCTA TTTCCGCTCC
ATCGGGGTGT TGGAGCTGGT GAAGGAAAAA CTGCCCGTCT CGATCACCCT TGGCCTGTGG
TCCACGCTGA TCGCCTATAT CGTGTCCATC CCGCTTGGCA TCCGCAAGGC GGTGCGCGAC
GGGTCCACAT TTGACAGCGT GACGTCCGGT ATCATCATTG TGGCCTACGC CATCCCCGGG
TTCCTCTTTG CGATCATGCT GCTGGTGCTG TTTGCGGGCG GGCGGTATCT GCAGTGGTTC
CCTTTGCGCG GCCTGACGTC CGATGGGTTT GAGGATATGA CCTTCCTTCA ACAGATCGGG
GATTACTTCT GGCACATCAC CCTGCCGGTT CTGGCCTCTA CGATTTCGGC GTTTGCCACG
CTTACACTTT TGACGAAGAA CTCCTTCCTG GATGAGATCA AGAAGCAATA CGTGATGACG
GCCAAGGCCA AGGGCTTGCC GGAACGCCGC GTGCTCTACG GCCACGTCTT CCGCAACGCG
ATGTTGATCG TGATCGCGGG CTTTCCTGCC GTTTTTGTGG GCGTGTTCTT CGGCGGAAGC
CTGATCATCG AGACGATCTT CTCCCTCGAC GGGCTGGGTC GCTTGGGCTT TGAGGCGGCG
GTGTCGCGCG ATTATCCGGT CATGTTTGGC ACGCTCTATG TTTTCGGGCT GATTGGCCTG
ACCGTCGGCC TCATCTCGGA CCTCATGTAT GTGTGGATCG ACCCGCGCAT CGACTTTGAA
ACGCGGGAGG GTTGA
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| Protein sequence | MGSYILRRLL LIIPTLLGVM MVNFILIQFV PGGPIDQVIA QLEGDGDVFA GISGGGSEAI
GDDSDLGGVS QGARGLPPQF LESLRVEFNF ARVVCAPDFT GTPDLDADEC FAEDIPIGER
FLLMMGDYLR FDFGESYFRS IGVLELVKEK LPVSITLGLW STLIAYIVSI PLGIRKAVRD
GSTFDSVTSG IIIVAYAIPG FLFAIMLLVL FAGGRYLQWF PLRGLTSDGF EDMTFLQQIG
DYFWHITLPV LASTISAFAT LTLLTKNSFL DEIKKQYVMT AKAKGLPERR VLYGHVFRNA
MLIVIAGFPA VFVGVFFGGS LIIETIFSLD GLGRLGFEAA VSRDYPVMFG TLYVFGLIGL
TVGLISDLMY VWIDPRIDFE TREG
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