Gene Jann_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3852 
Symbol 
ID3936332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3948291 
End bp3948764 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content64% 
IMG OID637906230 
ProductFixH 
Protein accessionYP_511794 
Protein GI89056343 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5456] Predicted integral membrane protein linked to a cation pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAG AGACCGCACG TAAACTCACC GGCTGGCATG TCTTTGGCAT TTTTGGGGGC 
TGCTTTGGCA TCATCATCGG TGTGAACTTG TTCATGGCGT TTCAGGCCGT GTCGACCTTC
CCGGGGCTGG AGGTCTCGTC CAGCTACGCC GACAGCCAGA CCTTTGACTT GCGCCGCCAT
GCACAGGATG CCTTGGGGTG GGAGGCATCG GTGGAGGCGG CAGATGATAC GTTGGCCCTG
ACATTGGTTG ATGCGGAAGG CCGCCCGGTT TATCCGGCGG AGTTGGAGGT GCTTCTGACC
CGGCCCACCA CCCGCGCCGA TGATCAAGTT CTGGCGCTGA CGCGCGGCCC GAACGGCACC
CTGACAGCAC CAGCGGATCT GGACGCGGGC CGTTGGCGGC TGCGCCTGAC CGGCGCCGCG
CGCGACGGCA CCGAGTACCG CCATAACATC ACCTTCACGG TATCGGCCCA ATGA
 
Protein sequence
MTTETARKLT GWHVFGIFGG CFGIIIGVNL FMAFQAVSTF PGLEVSSSYA DSQTFDLRRH 
AQDALGWEAS VEAADDTLAL TLVDAEGRPV YPAELEVLLT RPTTRADDQV LALTRGPNGT
LTAPADLDAG RWRLRLTGAA RDGTEYRHNI TFTVSAQ