| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3845 |
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| Symbol | hemC |
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| ID | 3936325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3940110 |
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| End bp | 3941066 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906223 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_511787 |
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| Protein GI | 89056336 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA ATTTACCGAC CCCCGCCGCT CCCCTTCGCA TTGGTACCCG AGGCTCCCCG
CTGGCATTGG CGCAAGCCCG GGAAACCCGC GCCCGCCTGA TGGCTGCCTG GGATCTGCCG
GAGGATGCGT TTGAGATTGT GGTGATCAAA ACCACGGGCG ACGACCGCTC CCTGATCGAT
GCGGATGTGG CGCTGAAAGA GCTTGGCGGA AAGGGGCTGT TCACCAAGGA AATCGAGGAG
GACATGCTGA CGTCTTCCAT CGACATTGCG GTGCATTCCA TGAAGGATAT GCCGACGGTG
CAACCCGATG GCCTGATGCT CGATTGCTAC CTGCCGCGCG AAGACGTGCG CGATGCATTT
GTGTCTGTGA ATCACGATGG TCTGCATGCG TTGCCTGAAG GGGCGATCGT CGGCTCTTCC
TCCCTGCGGC GTCGCGCGCA GCTGTTTGCC CGCAGGCCCG ACCTGAATGT GGTGGAGTTC
CGCGGCAATG TGCAAACGCG GATGAAGAAA CTGGGCGGTG GCGTGGCCGA TGCGACGTTT
CTGGCTATGG CGGGCCTGCG TCGCTTGGGC ATGGAAGAGG TGGTAAAATC CGCAATTGAG
GTTGAGGATA TGCTGCCCGC CGTGGCCCAG GGTGCGATAG GGATCGAGCG TCGGGTCAGC
GATACGCGAG CTGGTGATAT GCTGGCAGCG ATCCACAATA CGGAAACGGG CCAACGGCTT
GCAGCGGAAC GGTCTTTTTT GAAAGGGCTC GATGGGTCCT GCCAGACCCC CATCGCGGCG
CTGGCGGAAC TGGACGGCGG AACGCTACGG TTGCGCGGTG AAATCCTGCG CCCCGATGGG
TCGGAGGTTT TGACCGATGA CCGCACCGCG CCTATCGAAG ATGGGGCTGC CCTCGGGGCG
GATATGGCAC GGGACCTGCG GGCACGGGCG GGAGACGGCT TCTTCGACTG GCATTGA
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| Protein sequence | MTTNLPTPAA PLRIGTRGSP LALAQARETR ARLMAAWDLP EDAFEIVVIK TTGDDRSLID
ADVALKELGG KGLFTKEIEE DMLTSSIDIA VHSMKDMPTV QPDGLMLDCY LPREDVRDAF
VSVNHDGLHA LPEGAIVGSS SLRRRAQLFA RRPDLNVVEF RGNVQTRMKK LGGGVADATF
LAMAGLRRLG MEEVVKSAIE VEDMLPAVAQ GAIGIERRVS DTRAGDMLAA IHNTETGQRL
AAERSFLKGL DGSCQTPIAA LAELDGGTLR LRGEILRPDG SEVLTDDRTA PIEDGAALGA
DMARDLRARA GDGFFDWH
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