| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3840 |
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| Symbol | |
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| ID | 3936320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3934973 |
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| End bp | 3936028 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906218 |
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| Product | ABC transporter related |
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| Protein accession | YP_511782 |
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| Protein GI | 89056331 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGCC TGCAACTAAC AGACGTCATC AAACGCTACG GCAAGACCCA GGTCATCCAT
GGGATCGACC TGACAATCGA TGATGGGGAG TTCTGCGTCT TCGTCGGACC GTCAGGCTGT
GGAAAATCCA CGTTGCTGCG GATGGTCGCC GGGCTGGAAG AGACGACCGA AGGCAAAATG
TCCATTGGGG AGCGCGACGT GACCCGCGCC GATCCGGCGG ACAGGGGTGT AGCCATGGTG
TTCCAGACCT ACGCTCTGTA TCCACATATG ACGGTGGCCG AGAACATGGG CTTCGGCCTG
AAGATGAACG GCTACCCCAA GGCCGAGATC GACGAAAAGG TGAATGAGGC CTCGCGCATC
CTGAAACTGG ACGATTACCT TGCGCGCAAG CCCAAGGCCC TGTCCGGTGG TCAGCGTCAG
CGGGTTGCCA TTGGCCGCGC GATTGTGCGC GGACCGGACG TGTTCCTATT TGATGAGCCG
TTGTCGAACC TCGACGCCGA GTTGCGGGTG GAGATGCGGG TAGAGATCGC CCGTCTGCAC
AAGGAAATCG GCGCGACGAT GATCTACGTG ACCCACGACC AGGTGGAAGC CATGACTTTG
GCCGACAAGA TTGTCGTGCT GCGCGCGGGC TATATTGAGC AGGTCGGCGC GCCACTCGAC
CTCTATAACG ATCCTGACAA CAAGTTCGTC GCAGGCTTCA TCGGCTCTCC GGCGATGAAC
TTTTTTGACG GGCAATGCAC CGGCGGCTTG ATCACCGTGC CCGCCCTTGG CGGTGCCGAG
ATGCCCGCCC CTCTCAGCAT GGTCGGCGAC GGGCCAATTA TCGTGGGTGT GCGCCCCAAC
AAGGTCACGC TGAAGGAAGG TGCGACCCAT ACCGTCGACC TGTCCGAGCG GTTGGGCGGC
GTCAGCTACC ATTATGTTTC GTCCCCCGAT GGCGCAAAAA TTGTGGTGGA GGCCCATGAC
CAGGACGCAC CGCCCTCGGG GACACCCACC GGTATCGAGT TTGACGTCGC AGATGCGTAT
TTCTTTGACG CCAAGACCGA GGCGCGGCTG CGTTAG
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| Protein sequence | MSGLQLTDVI KRYGKTQVIH GIDLTIDDGE FCVFVGPSGC GKSTLLRMVA GLEETTEGKM
SIGERDVTRA DPADRGVAMV FQTYALYPHM TVAENMGFGL KMNGYPKAEI DEKVNEASRI
LKLDDYLARK PKALSGGQRQ RVAIGRAIVR GPDVFLFDEP LSNLDAELRV EMRVEIARLH
KEIGATMIYV THDQVEAMTL ADKIVVLRAG YIEQVGAPLD LYNDPDNKFV AGFIGSPAMN
FFDGQCTGGL ITVPALGGAE MPAPLSMVGD GPIIVGVRPN KVTLKEGATH TVDLSERLGG
VSYHYVSSPD GAKIVVEAHD QDAPPSGTPT GIEFDVADAY FFDAKTEARL R
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