| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3830 |
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| Symbol | |
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| ID | 3936310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3923441 |
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| End bp | 3925339 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906208 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_511772 |
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| Protein GI | 89056321 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.247674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCC AGCGGACGCT TGGCACCTGT TACTACCCCG AGCATTGGCC TGAGAAGATC
TGGGCGGAGG ATGCTGCGCG CATGGCCGTC CTTGGGCTGA CCTGGGTCCG TATTGGAGAG
TTCGCCTGGA GCCGGTTGGA ACCCTCCCCC GGCGATTTGC AGTTCGACTG GCTCGACCGT
GCGATTGACG TGCTGCATGC GGCAGGCCTC AAGGTTGTGC TTGGCACCCC GACCGCCACG
CCGCCCCGTT GGATGGTCGC GCGGCACCCC GATATGCTTG CGGTTGATGA CCAGGGTAGG
CCTCGAAAAT TCGGCTCCCG CCGCCATTAC TGTTTTTCCC ATGACGGCTA CCGCGAAGAA
GGTGTCCGGA TCACTGGCCT TCTGGCCGAG CGGTTTGGGC GCAAGGTGGA CGCATGGCAG
ACCGATAACG AATATGGCTG CCATGACACG GTCTATAGTT ACTCGGACGC CGCCCAAACT
GCGTTCCGGG AGTGGCTGGC GCAGAAATAT CAATCCCCAG ATGCGCTGAA CCGCGCTTGG
GGCAATGTCT TCTGGTCGAT GGACTATGAC AGTTTTGACG ATATCGACTT GCCGAACCTG
TCGGTGGCAG AGCCCAACCC GTCCCACGCG CTGGACTTTC GCCGCTTCTC GTCCGACCAG
GTCGCCCGCT TCAATGGCGC GCAAGTCGCC GCGATCCGTG CCCATTCCGA CGTGCCAATC
AGCCACAATT ACATGGGTCG GATCGTCGAA TTCGATCACT TCGCCACCGG ACGCCAGATG
GAAATCGCGA CGTGGGACAG CTACCCGTTG GGCTTTCTGG AGGACCGCCT GGAAAGCTCG
CCTGAACACA AGCGCCGTTA TGCCCGCCAG GGTGATCCGG ATTTTCAGGC CTTCCACCAC
GATCTTTACC GGGCTGTCGG ACAAAATGGC CGCTGGTGGG TGATGGAGCA ACAGCCCGGC
CCCGTGAACT GGGCCCCTCA CAATCCCGCG CCGCTGCCTG GCATGGTGCG CTTCTGGACG
TGGGAGGCCT TCGCCCACGG CGCCGAATGT ATCGCGTATT TCCGCTGGCG GCAGGCCCCT
TTCGCGCAGG AGCAATACCA TGCGGGCCTT CTCCGCCCCG ACAATGTTGA AGCGGAGGGT
TTTGCCGAGG CCGCGCAGGT CGCCCGCGAA TTGCAGGACA TGCCAGCGGT CGAACACACC
CAAGCCCCGG TGGCCCTCGT GTTCGACTAC GCCAGTGCCT GGGGCTGGAG CGTTCAGCCG
CAAGGCGCAG GCTGCGACTA CTTTCGTTTG GTGTTTGAGG TGTATCGCGG CCTGCGCAAA
CTGGGTCTTT CTGTCGATAT CCTTCCGCCG GATGCCAAGA CGCTGAACGG CTACGCCCTC
GTCCTCGCCC CCGGCGTTCT CACCCTGTCC GACGCGCTGA AGGCCGCCCT ATCCGAGACG
ACAGCCCAGG TCCTTCTCGG ACCGCACACA AATGCAAAGA CACCGGCGCT TGGCATCCCG
GTCCCGTTAC CTCCTGCGAT TTCAGGGCTG TCTGCCATCG TCGCCCGTGT GGAAACCCTC
CGCAACGATA TGCCGATCCC GGCCGAAAAT GGCGGCTCTG TGAAGCTGTG GTTTGAGCAT
CTTGAGACGA CGCATGATGC GGTTGAGAAA ACAGAAGCAG GCGCGCCCAT TCTCGTTCAA
TCCGCCAACC TTTCGTATCT TGCGGGTTGG CCCGATGAGA TGCTGCTGGA GCGGGTTCTG
ACCCGGGCTT CCTCTGCCGC CGGTCTCTCC CCCGAACCCT TGCCCCAGGA CATCCGTATC
CGTGACACCG GCACCACGCG GTTTGTGTTC AATCACGGCC CCGATGCCGT CGCCTACAAT
GGCCAAAGCA TCCCACCAGC TGGTGTTACT TGGGACTGA
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| Protein sequence | MTLQRTLGTC YYPEHWPEKI WAEDAARMAV LGLTWVRIGE FAWSRLEPSP GDLQFDWLDR
AIDVLHAAGL KVVLGTPTAT PPRWMVARHP DMLAVDDQGR PRKFGSRRHY CFSHDGYREE
GVRITGLLAE RFGRKVDAWQ TDNEYGCHDT VYSYSDAAQT AFREWLAQKY QSPDALNRAW
GNVFWSMDYD SFDDIDLPNL SVAEPNPSHA LDFRRFSSDQ VARFNGAQVA AIRAHSDVPI
SHNYMGRIVE FDHFATGRQM EIATWDSYPL GFLEDRLESS PEHKRRYARQ GDPDFQAFHH
DLYRAVGQNG RWWVMEQQPG PVNWAPHNPA PLPGMVRFWT WEAFAHGAEC IAYFRWRQAP
FAQEQYHAGL LRPDNVEAEG FAEAAQVARE LQDMPAVEHT QAPVALVFDY ASAWGWSVQP
QGAGCDYFRL VFEVYRGLRK LGLSVDILPP DAKTLNGYAL VLAPGVLTLS DALKAALSET
TAQVLLGPHT NAKTPALGIP VPLPPAISGL SAIVARVETL RNDMPIPAEN GGSVKLWFEH
LETTHDAVEK TEAGAPILVQ SANLSYLAGW PDEMLLERVL TRASSAAGLS PEPLPQDIRI
RDTGTTRFVF NHGPDAVAYN GQSIPPAGVT WD
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