| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3825 |
|---|
| Symbol | |
|---|
| ID | 3936305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3917709 |
|---|
| End bp | 3918620 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637906203 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511767 |
|---|
| Protein GI | 89056316 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTTA CCATGAACAA AGATGTTTTC ATCACCTGCG CGGTCACCGG CTCCGGCTCG
ACCCAGGATC GCAGCCCCCA TGTGCCACGC TCGCCCAAAC AGATCGCCGA AAGTGCGATT
GAGGCCGCCC GCGCGGGCGC AGCGATCGTC CATTGCCACG TCCGTGATCC CGAGAGCGGT
GCGCCCTCAC GCGATCTGTC CTATTACCGG GAGGTGACCG ACCGCATCCG GGAGGCCGAC
ATTGACGTCG TCCTGAACCT GACGGCGGGC ATGGGGGGCG ACATCACATT CGGCTCGACC
GACGCGCCGT TCCCGGTGGA TGAAGCGGGC ACCGATATGG TCGGGGCGGC CGAGCGCGTG
GCGCATATCG CCGATTGCCT GCCCGAGATC TGCACGCTGG ATTGCGGCAC GATGAACTTT
GCCGAGGCCG ACTACGTCAT GACCAACACC CCGGGCATGC TCCGCGCCAT GGGACGGATG
ATGACGGATC TGGGTGTGAA GCCGGAGATT GAGGCGTTTG ATACTGGCCA TCTTTGGTTC
GCAAAGGAGC TGGTGAAGGA GGGCGTGCTC GACAGTCCCG CGCTGGTGCA GCTTTGCATG
GGCGTGCCTT GGGGCGCACC CGATGACCTC AATACATTCA TGGCAATGGT CAACAATGTG
CCGGACAATT GGACCTTCAG TGCCTTCGCG CTTGGGCGCA ATGAAATGGC CTACGTTGCG
GCATCCGTTC TCGCCGGCGG CAATGTGCGC GTCGGATTGG AGGACAATCT CTGGTTGGAG
AAGGGCGTAT TGGCGACCAA CGCGCAGTTG GTTGAGCAGG CCGTTGGCAT TATCGAGGGG
ATGGGCGCAC GGGTGATCGG CCCGGACATG GTGCGCGAGA CACTGGGCCT GACCAAGCAG
GCCCCGGCAT GA
|
|---|
| Protein sequence | MPLTMNKDVF ITCAVTGSGS TQDRSPHVPR SPKQIAESAI EAARAGAAIV HCHVRDPESG
APSRDLSYYR EVTDRIREAD IDVVLNLTAG MGGDITFGST DAPFPVDEAG TDMVGAAERV
AHIADCLPEI CTLDCGTMNF AEADYVMTNT PGMLRAMGRM MTDLGVKPEI EAFDTGHLWF
AKELVKEGVL DSPALVQLCM GVPWGAPDDL NTFMAMVNNV PDNWTFSAFA LGRNEMAYVA
ASVLAGGNVR VGLEDNLWLE KGVLATNAQL VEQAVGIIEG MGARVIGPDM VRETLGLTKQ
APA
|
|---|
| |