| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3821 |
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| Symbol | |
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| ID | 3936301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3912570 |
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| End bp | 3913505 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906199 |
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| Product | transcriptional regulator |
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| Protein accession | YP_511763 |
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| Protein GI | 89056312 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.958609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGATA CGTTTTCCAT GTTGCTCTTC GACGGCTTCT CCAACCTTTG TCTTGCCAAT
GCGGTGGAAC CGTTGCGTGC CGCCAACACG CTGGCGCGTG CTGACCTTTA CGAATGGACA
TTTCAATCCC TGGGCACCGC GCTCGTCCGC TCCTCCAGCG GGCTGCCTGT GCAGGCAACA
CCGCTGTCCT CGCTGCGGTC CGGTGCGTAT CTGTTCGTGA TGCCGAGCTA TGGCTTTGAA
ACGTTCGCAA CGCCCGCCAC CGCACGCGCC TTGTGCGCCG CCGCGTCGCG GTTCACGGCG
TTGGCGGGGC TGGATACGGG GGCTTACTTG CTGGCCTATG CGGGCCTGTT GGAGGGACGC
AATGCGACCT GCCACTGGGA CATTCTGGGC CAGACGGCGG AGGCTTTCCC AGATGTTTCG
TTTACCGAGG ATCGCTTCAT CATTGATGGT GACCGGGCCA GTTGCGGGGG GGCTACGACG
ACGCTGGAGT TGATGCTGGA GCTGATTGAG CGTCGTCACG GCGCGGTTCT GTCGTTCGAG
GTGGCCGCGC TCTTTATGTA CGGAGAGCGG GCGCCCAATC TCGACCCGGC CCAGTTGATC
CCCACCCATA AAGCCGTGAA GGCTGCAGCC GCCCTGATGC GCCGCCATGT CGAGGATCCG
CTGAGCATCG ACGCCATCGC GGAGGCCCTC ACGCTGAGCC GTCGTGGATT GGAGCTGGCG
TTTCAAACCC ATGCGCAGAT GTCTCCGGGC CAGCTTTACC GTACCATCCG CCTGGCGGAG
GCGCGGCGCA GGCTGGAACA GACCCGGGAC AGCATCGCCG AGGTGGCCTT GCGTTCGGGC
TACCGCGATG CGACGGCTAT GGCGCGGGCT TTCAAGGCGG AATATGGGAT CACCCCGTCG
GCGGCGCGCG CAATGAGGAT GGCGGAGGGG TCATGA
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| Protein sequence | MPDTFSMLLF DGFSNLCLAN AVEPLRAANT LARADLYEWT FQSLGTALVR SSSGLPVQAT
PLSSLRSGAY LFVMPSYGFE TFATPATARA LCAAASRFTA LAGLDTGAYL LAYAGLLEGR
NATCHWDILG QTAEAFPDVS FTEDRFIIDG DRASCGGATT TLELMLELIE RRHGAVLSFE
VAALFMYGER APNLDPAQLI PTHKAVKAAA ALMRRHVEDP LSIDAIAEAL TLSRRGLELA
FQTHAQMSPG QLYRTIRLAE ARRRLEQTRD SIAEVALRSG YRDATAMARA FKAEYGITPS
AARAMRMAEG S
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