| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3816 |
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| Symbol | |
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| ID | 3936296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3905708 |
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| End bp | 3907276 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906194 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_511758 |
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| Protein GI | 89056307 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.961587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0948956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAT TGTCCAATAT GGGCGGGATG AGCCGCCGAA CGATGCTGCA AGGCACCGCC
GCCGTCGGCA CCGCCGCGCT GATCACACCC TGGGGGACGC CGCTGCGCGC GCAGCCTGTG
CAGGGCGGAA CATTGCGGGT TGGCATGGCG CACGGCTCAA CCACCGACGC GCTGGACCCG
GGCACCTGGG AAGCAGATTT CATGATCTTT CAGGCCCATA CCCGCAACAA CTACCTGACC
GAGATCGCAG CAGACGGCTC CCTCGTGCCG GAACTGGCCG AAAGCTGGGA AGCGTCTGAG
GATGCCGCGA CCTGGACCTT CACGATCCGC TCGGGCGTTG AATTCCATTC TGGCCACGTG
CTGACGGCGG AAGACGTTGT CGCCTCCATC AACCACCACA GGGGCGAAGA CAGCACCTCT
GCCGCTGCGC CTATCGTGTC GGCCATCACC GATATGACGG TGGATGGCAT GAACGTCGTG
GTCACGCTGG CCTCCGGCAA TGCGGACTTC CCGTTTGTGA TGTCCGACTA TCACCTGCCG
ATCCTGCCCG CCCAGGCCGA TGGCACAATC GACCCCAACA CCCAGGACGG CTGCGGCCCG
TTCCGCATTG TTGAGATCGA ATTCGGCGTT GGCGCCTCCT ACGCGCGCCA TGACGGCTAT
TGGAAAGAGG GTTTGCCCCA TTTCGACGCG ATTGAGCAGA TCGTCATCTT CGACGATGCC
GCCCGCCAGA ACGCGCTGAT TTCTGGAGAG GTCGATTACA TCGACACCGC CGACCTCAAC
ACCGTGCACC TGCTGGAGCG CGCGCCGGGG ATCGAGATCC TGTCCGTGAC CGGCACGCAG
CACTATGGCC TGCCGATGGA CACGCGGGCG GAGCCGTTCA ATGATCCCAA CGTCCGTCTG
GCGCTGAAGT ATTCGATTGA CCGGACCCAG CTGGTGGACA CGATCCTGAA CGGCTACGGC
TCCATCGGCA ACGACCACCC CATCGGCTCC GGCCAGCGGT TCTTCAACAC CGAGTTGGAG
CAGAAGGAAT ACGATCCGGA TCGTGCGCGC TTCCACCTGG CCGAGGCCGG GATGGAAAGC
CTCGACGTGG ACATCCACCT GGCCGACGCC GCCTTCGCGG GTGCGATGGA CGCGGGCGTG
TTGTTCTCGG AAAGTGCTGC GGCGTCCGGC ATCAACCTTA ACGTCGTGCG CGAACCCAAC
GACGGCTACT GGTCCAACGT CTGGATGCAG AAGCCCTTCG CGGGCACCTA TTGGGGCGGT
CGCCCGACCG AAGACCTGAT GTTCGCGACG GCCTACGAGC GCGGCGTGCC ATGGAACGAG
ACGTTCTGGG ACAACGAGCG GTTCAACGAC CTCCTGCTTC AGGCCCGCTC CGAGCTGGAT
GAGGACCTGC GCCGCGACAT GTATTTCGAG ATGCAGCAGA TCGTGTCCGA CGATGGCGGG
ATCATCATCC CGATGTTCGC CAATTACGTC GGCGCCTACA GCGATGCCCT TGCCCATCCC
GAGCAGGTCG CGTCGAACTG GCGCAATGAC GGCCACCGGA TAGGCGAACG CTGGTGGTTC
GCAGCTTAA
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| Protein sequence | MKRLSNMGGM SRRTMLQGTA AVGTAALITP WGTPLRAQPV QGGTLRVGMA HGSTTDALDP
GTWEADFMIF QAHTRNNYLT EIAADGSLVP ELAESWEASE DAATWTFTIR SGVEFHSGHV
LTAEDVVASI NHHRGEDSTS AAAPIVSAIT DMTVDGMNVV VTLASGNADF PFVMSDYHLP
ILPAQADGTI DPNTQDGCGP FRIVEIEFGV GASYARHDGY WKEGLPHFDA IEQIVIFDDA
ARQNALISGE VDYIDTADLN TVHLLERAPG IEILSVTGTQ HYGLPMDTRA EPFNDPNVRL
ALKYSIDRTQ LVDTILNGYG SIGNDHPIGS GQRFFNTELE QKEYDPDRAR FHLAEAGMES
LDVDIHLADA AFAGAMDAGV LFSESAAASG INLNVVREPN DGYWSNVWMQ KPFAGTYWGG
RPTEDLMFAT AYERGVPWNE TFWDNERFND LLLQARSELD EDLRRDMYFE MQQIVSDDGG
IIIPMFANYV GAYSDALAHP EQVASNWRND GHRIGERWWF AA
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