Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3814 |
Symbol | |
ID | 3936294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3902111 |
End bp | 3904063 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637906192 |
Product | peptidase S15 |
Protein accession | YP_511756 |
Protein GI | 89056305 |
COG category | [R] General function prediction only |
COG ID | [COG2936] Predicted acyl esterases |
TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0281034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CGTTTGACGA TATCCCCACT GTCTGGATCC CGATGCCCGA TGGCGTGCGA CTGGCCGCGC GCGTTTGGCT GCCAAAGGGG CCGTCTGCGG CTGTGCTGGA ATACCTCCCC TACCGTCGCC GCGACGGAAC CTCGCTGCGC GACGCCTCCG TTTATCCGGA GTTCGCGCGC ATGGGTCTTG CGGGGGTGCG CGTCGACATA CGCGGAACTG GCGATTCCGA AGGCCACTTT GACGACGAAT ACTCAGAGCA GGAGCTGAGC GACGGGGAAG AGGTGATCAG GTGGATCGCT GCTCAACCTT GGTGCGACGG CAACGTTGGC ATGATGGGTA TCTCCTGGGG CGGGTTCAAT GCACTGCAAC TGGCGGCCCG CAATCCACCC GCGTTGAAGG CCGTGATTTC CATCGCCTCA ACGGTGGACC GGTTCGCCGA CGATATCCAT TTCAAGGGCG GCGCGCATCT GTCGGCTAAT CTTTACTGGG CCACGCAAAT GCTCAGTCGC GCAGCCATGC CGCCGGATGC GGCCGTCGTG GGCGAAGGCT GGCGGACGCA GTGGAAAGAC CGGCTGGCGC ATTTGCCCGC CCTGATCTTC CCCTGGATGG CGCATCAGCG CCGCGATGAT TACTGGAAGC ACGGCTCCAT CTGTGAGGAT TTCGGCGCGG TTGAGGCCCC GGCCATGATG ATCGCCGGAT GGGCCGACGG GTACCGCAAC ACGCCGTGGG ACGCACGGGA AGGCATCGGC AACGAAGCAC GGTCGATCAC CGGGCCATGG GTGCATCTTT ACCCGCATTT CGCGGTGCCG GAGCCTCGGT TGGACTTTGT CGGAGAGGCC GCACGCTGGT GGGGTCGATG GCTGCAAGAC AAGGACACCG GCGCGGAGGC ATTGCCCGAC CACCGGCTGT ATCTGTCCGA GGCCGTCCGC CCGGACCAGA CCCGCGCCCA TGACCCGGGC CGCTGGATCG AGATCACACA GGGCGAAGAG ACGGAGACGG TCCTGCGCCT GTCCCCTGGC ACCCTTGGTG CGACGGGTAG CGGCCAGGTG ACGGTCCGGA CGCCGCTGGA TTGCGGCACC GATGCAGGAG AATTCTTCAC CCAGGGGGCG GATACCGACC TGCCCGATGA TCAGCGCGCC GATGACGGCA TGTCGGTGTG TTTTGAAACC GCGCCCTTAA CCACCCCGCT CGACATCATT GGCCGCCCGA CCCTGCACGT GCCCGTCACG ATCGATGCGC CTCAGGGCAC CCTGATCGCA CGGCTTGTGG ATGTGCATCC CGATGGCACG TCCCACCGTA TCAGCCTTGG CGTCCTGAAC CTGTCTCATC GGAATGGCTC GGAGAGCCCC GCTGCGATGA CACCCGGCAG GGTGGAGGAG GTGCGCGTGA TCCTGGACGC GACAGCCTAC AGGATCCGCC CCGGGCACAG GTTGCGGCTG GCCATCTCCA CCGCGTATTT CCCCATGATC GTGCCACCAC CCACGGACGT CACCGCCACG CTATCGCTGG ACACCGCGGC GCTTCATCTA CCCTCCACCC CCTACACCGA AATCAATCTG CCGCAGGCGG GGCAAGACAC GCGGCCGACC TTCCCAACCA CCCCCGGCTC TGTCGCGCGC CGTGTCAACC GCGACCGCGC CAGCGGCACC ACCTCCGTGA CCATCGAGAG CGACAGCGGC ACCACGACCC ACCCGGATTA CGGCATCGCC TGGCGTGATG TTCGGCGCTC TGACTATACG ATCACCCGGG GCGATCCGCT CAGCTATCGC GCGGTGGAGG TCTCGACGCA CGAGAGGACC CGTGACGGCA TACTCACCCG CGTCATTGCC ACGGGCCGCC TGCGCGCCAC GGAAACCGAT TGGATCATCG ACGCCCGCAT TGAAGCGACG GAGGATGATC AACCTTTTTT CAGCCGCGAT TGGTCCCGGA CCATCGCACG CGATCACATG TGA
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Protein sequence | MTDTFDDIPT VWIPMPDGVR LAARVWLPKG PSAAVLEYLP YRRRDGTSLR DASVYPEFAR MGLAGVRVDI RGTGDSEGHF DDEYSEQELS DGEEVIRWIA AQPWCDGNVG MMGISWGGFN ALQLAARNPP ALKAVISIAS TVDRFADDIH FKGGAHLSAN LYWATQMLSR AAMPPDAAVV GEGWRTQWKD RLAHLPALIF PWMAHQRRDD YWKHGSICED FGAVEAPAMM IAGWADGYRN TPWDAREGIG NEARSITGPW VHLYPHFAVP EPRLDFVGEA ARWWGRWLQD KDTGAEALPD HRLYLSEAVR PDQTRAHDPG RWIEITQGEE TETVLRLSPG TLGATGSGQV TVRTPLDCGT DAGEFFTQGA DTDLPDDQRA DDGMSVCFET APLTTPLDII GRPTLHVPVT IDAPQGTLIA RLVDVHPDGT SHRISLGVLN LSHRNGSESP AAMTPGRVEE VRVILDATAY RIRPGHRLRL AISTAYFPMI VPPPTDVTAT LSLDTAALHL PSTPYTEINL PQAGQDTRPT FPTTPGSVAR RVNRDRASGT TSVTIESDSG TTTHPDYGIA WRDVRRSDYT ITRGDPLSYR AVEVSTHERT RDGILTRVIA TGRLRATETD WIIDARIEAT EDDQPFFSRD WSRTIARDHM
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