Gene Jann_3814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3814 
Symbol 
ID3936294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3902111 
End bp3904063 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content65% 
IMG OID637906192 
Productpeptidase S15 
Protein accessionYP_511756 
Protein GI89056305 
COG category[R] General function prediction only 
COG ID[COG2936] Predicted acyl esterases 
TIGRFAM ID[TIGR00976] putative hydrolase, CocE/NonD family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0281034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CGTTTGACGA TATCCCCACT GTCTGGATCC CGATGCCCGA TGGCGTGCGA 
CTGGCCGCGC GCGTTTGGCT GCCAAAGGGG CCGTCTGCGG CTGTGCTGGA ATACCTCCCC
TACCGTCGCC GCGACGGAAC CTCGCTGCGC GACGCCTCCG TTTATCCGGA GTTCGCGCGC
ATGGGTCTTG CGGGGGTGCG CGTCGACATA CGCGGAACTG GCGATTCCGA AGGCCACTTT
GACGACGAAT ACTCAGAGCA GGAGCTGAGC GACGGGGAAG AGGTGATCAG GTGGATCGCT
GCTCAACCTT GGTGCGACGG CAACGTTGGC ATGATGGGTA TCTCCTGGGG CGGGTTCAAT
GCACTGCAAC TGGCGGCCCG CAATCCACCC GCGTTGAAGG CCGTGATTTC CATCGCCTCA
ACGGTGGACC GGTTCGCCGA CGATATCCAT TTCAAGGGCG GCGCGCATCT GTCGGCTAAT
CTTTACTGGG CCACGCAAAT GCTCAGTCGC GCAGCCATGC CGCCGGATGC GGCCGTCGTG
GGCGAAGGCT GGCGGACGCA GTGGAAAGAC CGGCTGGCGC ATTTGCCCGC CCTGATCTTC
CCCTGGATGG CGCATCAGCG CCGCGATGAT TACTGGAAGC ACGGCTCCAT CTGTGAGGAT
TTCGGCGCGG TTGAGGCCCC GGCCATGATG ATCGCCGGAT GGGCCGACGG GTACCGCAAC
ACGCCGTGGG ACGCACGGGA AGGCATCGGC AACGAAGCAC GGTCGATCAC CGGGCCATGG
GTGCATCTTT ACCCGCATTT CGCGGTGCCG GAGCCTCGGT TGGACTTTGT CGGAGAGGCC
GCACGCTGGT GGGGTCGATG GCTGCAAGAC AAGGACACCG GCGCGGAGGC ATTGCCCGAC
CACCGGCTGT ATCTGTCCGA GGCCGTCCGC CCGGACCAGA CCCGCGCCCA TGACCCGGGC
CGCTGGATCG AGATCACACA GGGCGAAGAG ACGGAGACGG TCCTGCGCCT GTCCCCTGGC
ACCCTTGGTG CGACGGGTAG CGGCCAGGTG ACGGTCCGGA CGCCGCTGGA TTGCGGCACC
GATGCAGGAG AATTCTTCAC CCAGGGGGCG GATACCGACC TGCCCGATGA TCAGCGCGCC
GATGACGGCA TGTCGGTGTG TTTTGAAACC GCGCCCTTAA CCACCCCGCT CGACATCATT
GGCCGCCCGA CCCTGCACGT GCCCGTCACG ATCGATGCGC CTCAGGGCAC CCTGATCGCA
CGGCTTGTGG ATGTGCATCC CGATGGCACG TCCCACCGTA TCAGCCTTGG CGTCCTGAAC
CTGTCTCATC GGAATGGCTC GGAGAGCCCC GCTGCGATGA CACCCGGCAG GGTGGAGGAG
GTGCGCGTGA TCCTGGACGC GACAGCCTAC AGGATCCGCC CCGGGCACAG GTTGCGGCTG
GCCATCTCCA CCGCGTATTT CCCCATGATC GTGCCACCAC CCACGGACGT CACCGCCACG
CTATCGCTGG ACACCGCGGC GCTTCATCTA CCCTCCACCC CCTACACCGA AATCAATCTG
CCGCAGGCGG GGCAAGACAC GCGGCCGACC TTCCCAACCA CCCCCGGCTC TGTCGCGCGC
CGTGTCAACC GCGACCGCGC CAGCGGCACC ACCTCCGTGA CCATCGAGAG CGACAGCGGC
ACCACGACCC ACCCGGATTA CGGCATCGCC TGGCGTGATG TTCGGCGCTC TGACTATACG
ATCACCCGGG GCGATCCGCT CAGCTATCGC GCGGTGGAGG TCTCGACGCA CGAGAGGACC
CGTGACGGCA TACTCACCCG CGTCATTGCC ACGGGCCGCC TGCGCGCCAC GGAAACCGAT
TGGATCATCG ACGCCCGCAT TGAAGCGACG GAGGATGATC AACCTTTTTT CAGCCGCGAT
TGGTCCCGGA CCATCGCACG CGATCACATG TGA
 
Protein sequence
MTDTFDDIPT VWIPMPDGVR LAARVWLPKG PSAAVLEYLP YRRRDGTSLR DASVYPEFAR 
MGLAGVRVDI RGTGDSEGHF DDEYSEQELS DGEEVIRWIA AQPWCDGNVG MMGISWGGFN
ALQLAARNPP ALKAVISIAS TVDRFADDIH FKGGAHLSAN LYWATQMLSR AAMPPDAAVV
GEGWRTQWKD RLAHLPALIF PWMAHQRRDD YWKHGSICED FGAVEAPAMM IAGWADGYRN
TPWDAREGIG NEARSITGPW VHLYPHFAVP EPRLDFVGEA ARWWGRWLQD KDTGAEALPD
HRLYLSEAVR PDQTRAHDPG RWIEITQGEE TETVLRLSPG TLGATGSGQV TVRTPLDCGT
DAGEFFTQGA DTDLPDDQRA DDGMSVCFET APLTTPLDII GRPTLHVPVT IDAPQGTLIA
RLVDVHPDGT SHRISLGVLN LSHRNGSESP AAMTPGRVEE VRVILDATAY RIRPGHRLRL
AISTAYFPMI VPPPTDVTAT LSLDTAALHL PSTPYTEINL PQAGQDTRPT FPTTPGSVAR
RVNRDRASGT TSVTIESDSG TTTHPDYGIA WRDVRRSDYT ITRGDPLSYR AVEVSTHERT
RDGILTRVIA TGRLRATETD WIIDARIEAT EDDQPFFSRD WSRTIARDHM