| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3810 |
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| Symbol | |
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| ID | 3936290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3896567 |
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| End bp | 3897448 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906188 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_511752 |
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| Protein GI | 89056301 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00430923 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAAAA GTCGGGTGAC CTTCAAGCAA CTTGAAGCCT TCGTTTGCGT CGTGGATACG
GGCACGTTTC GCAAAGCGGC CGGTATTCTC GGGACGACGC AGCCCAATAT CTCCACCCGG
ATCGCCGCGC TGGAGGACGT GCTGGGGACC ATCCTGATGC ACCGGGATGC GGGCTCAATT
CGCGTGACCG ACAAAGGAGC GGAACTGTTG GAGGCCGCAC GGGAAATCCT GCGGGCCGGC
GAGAACTTTT TGGAAATCGC TGGCCGCCAA GACCTGATTG AAGATCGCCT CCGCCTTGGC
GTGACAGAAC TTGTCGCCTG CACCTGGCTC CATGACTTCT TGCGCGCGTT CAAAGATCTT
TATCCAGCGG TGCGGGTGGA GTTGGACGTG AACCTGTCGA CAGAGATCGA GAAGGCGCTG
ATCACCCATC AGGTGGATCT GGCGCTGCAA ACGGGGCCCT TCGCACGGCC TGTTCCCGGC
ACCTTACCGC TTGGCGACTA TCCCTATTGC TGGGTTGCAG CGCCGTCCCT GACCCCGCCC
GCAAGCTTTG CGGCGCTCTT CGACGGTCCT GTGATCAGCC ATGGTCGCGA CACGCGCGCC
TCCCGCGCAT TGGCGGAGCA CGCGCGGGCG GAGGGGGTAG CCGTCAACCA GATCGTCCAT
TCCAGCAGCC TGACATCTTG CGTCGCCATG GCCGTAGACG CCATGGGCCC GGCGCTGTTG
CCGCGTCTGA TGGTGGAGGA CGCGATAGCA CAGGGGCGGT TGTCTGAGTT CACCTGCGGT
TGGCTGCCGG ATCAGTTGCA GCTCTTCGCC CGCTTCGATC CCCGCCGCAC ACCGCAATTC
GTCCGCGCCG CAGCCGACCT GGCCGTCGAG ATCGCAGGAT AA
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| Protein sequence | MIKSRVTFKQ LEAFVCVVDT GTFRKAAGIL GTTQPNISTR IAALEDVLGT ILMHRDAGSI
RVTDKGAELL EAAREILRAG ENFLEIAGRQ DLIEDRLRLG VTELVACTWL HDFLRAFKDL
YPAVRVELDV NLSTEIEKAL ITHQVDLALQ TGPFARPVPG TLPLGDYPYC WVAAPSLTPP
ASFAALFDGP VISHGRDTRA SRALAEHARA EGVAVNQIVH SSSLTSCVAM AVDAMGPALL
PRLMVEDAIA QGRLSEFTCG WLPDQLQLFA RFDPRRTPQF VRAAADLAVE IAG
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