Gene Jann_3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3809 
SymbolanmK 
ID3936289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3895358 
End bp3896494 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content65% 
IMG OID637906187 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_511751 
Protein GI89056300 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00442198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACATG ACATGCGATG GTGCGTCGGG TTGATGACCG GCACAGTCCT GGACGGCAAC 
ATCGACGTCG CCCTGTTGCA AACAGATGGC GAGCGCATCG GCGCATTCGG CCCCCATGCC
CTCTACCCCT ACGACGCGGG AACCAACGCG CTGCTAAAGC AATGCCTGTC GGCGGCGCAG
ACATGGGCAT TCAATGGGCC GGAGCCTGCG ATTTTCGCGG AGGCCGAGGC GCGGATCACG
CGCGCGCAAT CGGACGCGGT GGCCTGTCTT GTGGAGACGG CCGGGTTGTC TATGCGCGAT
ATTGCAGCCG TTGGGTTTCA CGGGCAAACC GTCCTGCACC GCGCGCCAGC ACCGGGTCGC
CTCGGCCAAA CGCGCCAGCT TGGCAATGGG CAGGACATGG CGCGCCGTCT GGCCACGGAT
GTGGTGTACG ACTTTCGAAG CGCGGATATG AAAGCGGGGG GCCAGGGCGC GCCTCTCTCT
GCCATCTATC ACAGCGCCCT TCTGGACACG CTGGACAACG CCCATGACAC CGCGATCCTG
AACCTTGGCG GCGTCGCCAA TATCACGGCC CGGGACGCGC GGGGCATGTT GGCGGCCTTT
GACACCGGGC CTGCCAACGC CCCGATCAAT GATTTTGTCG TCCATCGCGG ATTGGGCGAG
ATGGACAGGG ACGGCCAGCT GGCGGCCCAG GGTCGCGTGG ATGACGCGCG GTTTTCGACA
GCGCTGAGGC ATCCGTACCT GTCCCGACCC TATCCCAAAT CCCTCGACCG GTTCGACTTT
GGCCATGACT GGGTGGCGGA TCTCTCCGAC GCCGATGGCG CCGCGACGCT AACCGCTTTC
ACCGCATCGG CGGTGGGCCG GGGCCTGGAC CTGCTGCCTG TTCGGCCCAC GCGGTTGATC
GTTTGTGGGG GCGGTCGCCG CAATCCAACG CTACTGAAGA TGATCGCGAC CTATGCGAAG
GTCCATGTGG ACAACGCGGA GGATTGGGGT TGGGAAGGCG ACGCGACCGA AGCGCAGTGC
TTCGGGTATC TTGCCATGCG GCGGCTCCGT GACTTGCCGG TCACGTTTGC GGAAACCACG
GGCGTGCGTG CGCCCATGCC GGCGGGGCGT ATTGCACACG GGTCATCACC CGGGTGA
 
Protein sequence
MAHDMRWCVG LMTGTVLDGN IDVALLQTDG ERIGAFGPHA LYPYDAGTNA LLKQCLSAAQ 
TWAFNGPEPA IFAEAEARIT RAQSDAVACL VETAGLSMRD IAAVGFHGQT VLHRAPAPGR
LGQTRQLGNG QDMARRLATD VVYDFRSADM KAGGQGAPLS AIYHSALLDT LDNAHDTAIL
NLGGVANITA RDARGMLAAF DTGPANAPIN DFVVHRGLGE MDRDGQLAAQ GRVDDARFST
ALRHPYLSRP YPKSLDRFDF GHDWVADLSD ADGAATLTAF TASAVGRGLD LLPVRPTRLI
VCGGGRRNPT LLKMIATYAK VHVDNAEDWG WEGDATEAQC FGYLAMRRLR DLPVTFAETT
GVRAPMPAGR IAHGSSPG