| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3805 |
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| Symbol | |
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| ID | 3936285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3890896 |
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| End bp | 3891861 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906183 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511747 |
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| Protein GI | 89056296 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000414077 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00173265 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTATC TTCTAAGGCG CCTCGCGGTT TTTCCGCTGG TCATGCTGGG TGTGTCGATT
TTTGTTTTCG TTGCAATCCG ACTGGTGCCC GGCGACGCCA TCACGGCGAT GTTGGGCACC
GAAGGCGGCA TGCTGACGCC TGCTCAGCGG GAAGCGTTGA CCGCCTATTT CGGCCTCGAT
CAGAATTGGG CCATTCAATA TGTCCGCTGG CTTGGCGGGT TGTTTGGGGG CGATCTTGGG
ATCTCGGTCA CTTACGGCCA ACCGGTCCTC GACCTGATCC TGGAACGGTT TCCCCTGACG
CTGCAACTGG CGCTGATGTC GATGGTCATC GCCCTGCTGA TCGGCCTGCC GGCAGGCGTC
TTCGCCGCAA CGCAAGCCAA TCGCGCATCT GACCTGATCG TCAGGATCTT CGCGATGATC
GGCCAATCCA TGCCCAATTT CGTGGTCGCG TTGCTGCTAA TCTACGGCCT GTCGGTCGTT
TTCGGGGTCC TGCCGACGAT GGGCCGGTAC GTGCGGTTCA CCGAAGACCC CCTCGGCAAC
TTGGCGCAGA TGATCCTGCC TGCCTTCGCC CTTGGCACAG CTTTCGCGGC AGCCGTGACG
CGGATCACGC GCGCGGCGAT GCTGGATATA CTGAGCGAGG ACTACGTGCG CACCGCGCGA
TCGCAGGGGT TTTCGCAAGC CTACGTCATC TGGCGCCACG CCTTACCGAA TGCCCTGATC
CCGGTCCTGA CGCTGAGCGG TGTGGAATTT GGCTACCTTC TGGGCGGCGC GGTCATCGTG
GAGCAGATCT TTGCACTCCC GGGCCTTGGC CGCGTGGTCC TGGACGCTAT CGGAGAGAGG
GACTACGCCC TTGTCCAAGG CGTTATCCTG TTCATCGCCT TCAATTTCAT GGTGGTTAAC
CTGCTGGTCG ATCTGGCCTA CGCCGCCCTT GATCCGCGCA TTCGCTATGG CAGCGGCGGG
TCATGA
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| Protein sequence | MSYLLRRLAV FPLVMLGVSI FVFVAIRLVP GDAITAMLGT EGGMLTPAQR EALTAYFGLD
QNWAIQYVRW LGGLFGGDLG ISVTYGQPVL DLILERFPLT LQLALMSMVI ALLIGLPAGV
FAATQANRAS DLIVRIFAMI GQSMPNFVVA LLLIYGLSVV FGVLPTMGRY VRFTEDPLGN
LAQMILPAFA LGTAFAAAVT RITRAAMLDI LSEDYVRTAR SQGFSQAYVI WRHALPNALI
PVLTLSGVEF GYLLGGAVIV EQIFALPGLG RVVLDAIGER DYALVQGVIL FIAFNFMVVN
LLVDLAYAAL DPRIRYGSGG S
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