Gene Jann_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3794 
Symbol 
ID3936274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3880216 
End bp3881655 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content64% 
IMG OID637906172 
Productaldehyde dehydrogenase 
Protein accessionYP_511736 
Protein GI89056285 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.735096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00488906 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAAAA CGGCACGGCA CTTCATTGGC GGACATTGGC GGGATGACGG AGTCGACCCC 
CTTGGCAGCG TCAATCCCGC CGACGGCCAG GTCATCGGCC ACTACATCCC GGGTAATGCG
GATCTGGCTG ACGAGGCGGC TGCGGTCGCA AAGGCCGCGT TCGAGGAGAG TGAGTGGGCC
GCCTCCCCCC GGTTGCGCGC GCAGGCTCTG ATGGAAATCG CGGATGCACT GGACGCCGCG
AAAGACGACA TCGCGGACCT TGTCGTTGCG GAAAACGGGA AAATCCGGGC CGAGGCCATG
GGCGAAACCA TGGCGGGCGT ATCGGAAAGC CGTTACTATG CAGGCCTTGC ACGCGACATT
CGGGGCACCA TGCAGGAGGT TGCACCCGGC AAGCTATCCC TTTTTGCGCG GGAGGCGGCA
GGGGTTGCGG GCATCATCGT GCCATGGAAC GCGCCGGTGA CGTTGCTGAT CCGCTCCCTC
GCGCCCGCAT TGGCGGCCGG CTGCACGACG GTGATCAAGC CCGCCGCGCA AACGCCGCTG
GTCCATGCCC GGATCATGGA CTGCCTTACA TCCTGCCCAT CGCTGCCCGC CGGGGTCGTC
AACTCCATCA ATGAAGACGG GATTGCTGTG GGCCAGGCCA TGGTGGCCAG CCGGGATATC
GACGTGATTT CGTTCACCGG GTCGAGCCGG ACGGGAAAGC TGATCCAGGA AGGCGCGTCC
AAGACGCTGA AACGGGTGGG GCTGGAGCTT GGGGGTAAGG CGCCCGCCAT CGTCTTCCCC
GACGCCGATC TGGACCGGGC GGTGCGCGAG ATCACCCACG GCATCCTGCC CATCGCAGGC
CAGATGTGCG TCGCCGTGGC GCGTATTCTG GTGCATGAGA GCATCGCAGC GGATTTTGAG
GCGCGCATTA AAGCGGCTGT TGCCGCGATC CGGGTCGGCC CCGGTGACGA TCCCGCAAAT
CAATGCGGCG CGATCATTGA TTTGGACAAC CGCAGCCGCT TGTTGGGGCT GATCAATCGG
GCGGAAGAAG ACGGCCGCAT GATCCTGCGG GGCCAGGCCT TGGAGCAAGG TGCATTCCTG
ACGCCGACAT TGTTTCAGAT CGACGATGTC TCCTCCGACC TGGTGCAGGA GGAACTCTTC
GGCCCCATCG CGACGTTTGA GACGTTTGGA GATGAGGCGG AGGCGGTGAT GAAAGCCAAT
GCCACGGTCT ACGGCCTGGC GGCCTCGGTC TTCACCACCG ACGTGTCCCG GGCGCTCCGG
GTCAGCCGCG CCGTGCGTGC GGGCACGGTC TGGGTCAATG CGCACCTGCG TCTGTTCGCG
GAAGCCGAAA CCGGCGGCTA CGGGCAATCC GGCCTCGGGC GGCTCCACGG TCCCGAAGGC
TTGGCAGATT TTCTGGAAAC CAAGCATGTC TATTTTGAAC CTGGCGAGGT GGGAGGATGA
 
Protein sequence
MTKTARHFIG GHWRDDGVDP LGSVNPADGQ VIGHYIPGNA DLADEAAAVA KAAFEESEWA 
ASPRLRAQAL MEIADALDAA KDDIADLVVA ENGKIRAEAM GETMAGVSES RYYAGLARDI
RGTMQEVAPG KLSLFAREAA GVAGIIVPWN APVTLLIRSL APALAAGCTT VIKPAAQTPL
VHARIMDCLT SCPSLPAGVV NSINEDGIAV GQAMVASRDI DVISFTGSSR TGKLIQEGAS
KTLKRVGLEL GGKAPAIVFP DADLDRAVRE ITHGILPIAG QMCVAVARIL VHESIAADFE
ARIKAAVAAI RVGPGDDPAN QCGAIIDLDN RSRLLGLINR AEEDGRMILR GQALEQGAFL
TPTLFQIDDV SSDLVQEELF GPIATFETFG DEAEAVMKAN ATVYGLAASV FTTDVSRALR
VSRAVRAGTV WVNAHLRLFA EAETGGYGQS GLGRLHGPEG LADFLETKHV YFEPGEVGG