| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3790 |
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| Symbol | |
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| ID | 3936270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3874591 |
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| End bp | 3875571 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906168 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_511732 |
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| Protein GI | 89056281 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.531715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACA ACGCACTTAT CGCAGGGGCC GCCTTGGCCC TGAGCCCGAT GGCAACCCAG
GCCGAGGATC TGAGCCTCGC CTATTGGATG GGACCCGGCC ATCCGATGAA CGCCGCTGTG
TTCACGCCCT TCGCCGAAAA CCTCGCGGAG GTATCAGGCG GCGAGATGAC GGTGGAATTG
TTCGCCGGGG GGGCGCTCAA CGGCTCCCCA CCATCACAAT ACGGCATCAT GCTAGACGGC
GTGGCCGATA TCGCCTTCGT CATCCCGGGC TATACGGGCG ATGTCTTCCC GGTGACCGGC
GTCATCACTT ATCCCGGCAT CTGCGAAAGT GCCGCCGACT GCACCGCATC TTTGTGGCGC
GCCCGGGATC AGATCGCAGC GGAATATGAT GCCGTCCTTC TGGGGCTATG GGGCAACAAC
CCCCCGGTGC TGATCACCCG GGATCAACCC GTTCGCACGT TGGAGGACAT CGCAGGCATG
ATCGTTCGCG TCACGTCCAC ACAGGATGTG GCCTTCGCCG AGGCGCTTGG AGCATCAGGT
GTCACGCAGC CGGTGAATGT GATCAACCAG AACCTCACCA ACGGTGTCGT GGATGCCATT
GCCATCGGGC CCTCGGCCAT TGGGTCCTTC AATCTGCATG AGCCGGGCAA CTACATCACG
ACCTATTTCC CCGGCTCCGG GTCCGCCTTC GCGCTATTGA TGAACCAGGA CGTGTTCGAT
GACCTGACGG AGGAGCAACA GGGTTGGGTC ATGGCCGCCG CCGATGAGAG CCTATCGCAG
GCCGGCGGCG ACTTCTACGA CCGCGCCGCC GCACGGGGCC TTGAGATCGC CCGCGAGGCC
GGGGTGGAGA TCATCGACCT GACGCCTGAA GAACGGGCCC GTTGGGACGA GGCCATGGCA
CCGCTGATCG AAGAGCTTCG GGCCCAGGAC ATGGGTGGCA CGACGGCAGG CGCGATCATG
GACATCATGA TCGGCGAATG A
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| Protein sequence | MNYNALIAGA ALALSPMATQ AEDLSLAYWM GPGHPMNAAV FTPFAENLAE VSGGEMTVEL
FAGGALNGSP PSQYGIMLDG VADIAFVIPG YTGDVFPVTG VITYPGICES AADCTASLWR
ARDQIAAEYD AVLLGLWGNN PPVLITRDQP VRTLEDIAGM IVRVTSTQDV AFAEALGASG
VTQPVNVINQ NLTNGVVDAI AIGPSAIGSF NLHEPGNYIT TYFPGSGSAF ALLMNQDVFD
DLTEEQQGWV MAAADESLSQ AGGDFYDRAA ARGLEIAREA GVEIIDLTPE ERARWDEAMA
PLIEELRAQD MGGTTAGAIM DIMIGE
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