| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3782 |
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| Symbol | |
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| ID | 3936262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3865988 |
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| End bp | 3867178 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906160 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_511724 |
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| Protein GI | 89056273 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG CGCCACTTCC GCTGTCAGGG GTGCGTGTGA TTGACCTGAC GCGCATCCTG
TCCGGCCCGT TTTGTTCGAT GATCCTTGGG GATCTGGGCG CGGACGTCAT TAAGATCGAA
GGCCATGGCG GCGATGCCGT GCGGGGGCAG GGCCAGAAGG TCGACGGTTT GTCGTGGTAT
TTTGCGGCGT TCAATCGGAA CAAGCGGTCG CTCACGTTGG ATCTGAGATC CGATCAGGGC
AAAGAGGTGC TGGAGCGATT GCTGCGCGAC GCCGATATCC TGACCGAAAA CTTCAGACCC
GGCGTTCTGG CGAAGATGGG TCTGTCGCCG GATCGGCTGG CAGAGATCAA CCCAAAGCTC
ATCGTGGTCA GCGTCAATGG CTATGGCTCG ACGGGGCCCT ACGCCGACCG GCCCGCCTTC
GATTTCATCA CCCAGGCGAT GTCGGGGTTT ATGTCCACCA ATGGCACGCC GGCCTCTGGG
CCGATGCGTG CGGCCCCTCC GATCACGGAT CTGGTCGCGG GGCTTTATGC CGCGCTGGCG
GCAGTGGCGG CCTTGCGGGG GCGGGAGGCC GGGGGGCCTG CGCAGCACGT CGAGACGTCG
ATGATGATGT CGATGCTGTC GATGATGGCC TACCTCTCTG GCAATGCTCT GATCACCCGA
CAGGACCCGG TGCCTACGGG CAACGACCAT CCCATTGCGT CGCCCTATGG CCTCTTTCGT
GCGTCGGACG GGGACATCGC TGTCGCCCCA TCCACAGATG TGATCTGCGC CAAATTCCTC
AACGAGCTTG GCCTTGGGAC CCTGCTGGAC GATCCGCGTT TCGTGACCAA CGACACACGG
CTTTTGAACC GGGCTGACCT GAATGCACAG ATCAACCTCG CGCTGGCGAC GGACACTCAG
GAGGCCTGGA TCGAACGCCT GAATCGCGCA GGCGTGCCCT GCGGCAAGGT TCAAACGATG
ACCGAGGTTC TGTCGGATCC GCAGGTCGAG GCTCAGGACA TGGTCCTGTC AGTGCCCCAT
CCCGGGCACG GCACGGCGCA AATGACCGGT TTCCCGATGA AGTTTCACGC GACACCGTTA
CAGGTGCGCC ACCCCGCGCC GGAGCTTGGG GGCGATACCG AGACTGTCCT GCGGGAGGCG
GGGTATTCCG ACGACCAGAT CGCTCAATTG AAGGCCGATG GCGTGATCTA G
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| Protein sequence | MTDAPLPLSG VRVIDLTRIL SGPFCSMILG DLGADVIKIE GHGGDAVRGQ GQKVDGLSWY
FAAFNRNKRS LTLDLRSDQG KEVLERLLRD ADILTENFRP GVLAKMGLSP DRLAEINPKL
IVVSVNGYGS TGPYADRPAF DFITQAMSGF MSTNGTPASG PMRAAPPITD LVAGLYAALA
AVAALRGREA GGPAQHVETS MMMSMLSMMA YLSGNALITR QDPVPTGNDH PIASPYGLFR
ASDGDIAVAP STDVICAKFL NELGLGTLLD DPRFVTNDTR LLNRADLNAQ INLALATDTQ
EAWIERLNRA GVPCGKVQTM TEVLSDPQVE AQDMVLSVPH PGHGTAQMTG FPMKFHATPL
QVRHPAPELG GDTETVLREA GYSDDQIAQL KADGVI
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