| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3778 |
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| Symbol | |
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| ID | 3936258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3862587 |
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| End bp | 3863624 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906156 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_511720 |
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| Protein GI | 89056269 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.29277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGGA GGAACTTCAT GAACAAGATA CTGACCGCCG CCTCAGTCGC GGCATTCGCA
GCCTCGGGCG CGATGGCTGA AACATACAAC CTTCAAAGCG CGTTCGGGGC GTTGCCCGTC
TTGCACCCTG CCGCCGAACG GTTCGTGTCC AATGTCTCCA CGCTGACCGC GGGGGAGGTG
GACTTCAACT ATCTGCTGGC CGGTGAAATG TCGCCGCCGT TTGAGATTTT CGACAATGTC
AGTGCGGGCG CCATTGATGC GGGCTGGTCT TTCGCGGCCT ATGCATCGGG CCGAGAGCCT
GCGGCGGCGC TGTTTGGCTC GGTTCCGTTT GGCGGTGACC CGCTGTCCTA CATCAGCTGG
CTGCACCATG GCGGCGGGTT GGAATTGTGG CGCGAGATCT ACGAGCCCTA CAATCTGGTG
CCTATGGCCT GCGGCGTCAT CCTGTCCGAG GCGGGCGGCT GGTACACGTC TGAGATCAAT
GCGCCGGAGG ATTTGCAGGG TCTCAACATC CGGATCGGTG GCCTTGGCGG CGAGATTCTC
GCGCGGCTTG GGGCCAACGC CATGTCCCTG CCCGCCGGAG AGATTTCAAC CGCGCTGGAG
ACCGGTCGTC TGGATGCGAC AGAGCTCTCG TTCCCGCTGG TCGATGCGCT TCTGGGCTTC
GATGAGGTGG CGCAGAACTA CTATTTCCCC GGCTGGCACC AGCCTGCGGG CTTTATCGAG
TTCTATATGA ACAAGGACCG TTGGGACGCC CTGACAGATC AGCAGCGCAC AGCAATCGAA
GTCTCCTGCG CCGACGCAAA CCTTTACGCC TTGGGGGTTG CGGCCGGCGC GCAAAGCGCC
GTGTTGGACG ATTTCCGCGC CAACGGTGTC AACGTCCAGC GCTTTCCCGA CAGCGTGATG
GAGGCGTTGC GCACGGCTGC CGATGAAGTC TACGCCGAGA ATGCCGCAGA GGATGAAATG
TTTGCCCGCG TCATCGAAAG CTACCGCGCC TATGCGGACA GCTATGAGGA ATACCGCGCG
CTATCTGATC TGAACTGA
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| Protein sequence | MKGRNFMNKI LTAASVAAFA ASGAMAETYN LQSAFGALPV LHPAAERFVS NVSTLTAGEV
DFNYLLAGEM SPPFEIFDNV SAGAIDAGWS FAAYASGREP AAALFGSVPF GGDPLSYISW
LHHGGGLELW REIYEPYNLV PMACGVILSE AGGWYTSEIN APEDLQGLNI RIGGLGGEIL
ARLGANAMSL PAGEISTALE TGRLDATELS FPLVDALLGF DEVAQNYYFP GWHQPAGFIE
FYMNKDRWDA LTDQQRTAIE VSCADANLYA LGVAAGAQSA VLDDFRANGV NVQRFPDSVM
EALRTAADEV YAENAAEDEM FARVIESYRA YADSYEEYRA LSDLN
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