| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3772 |
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| Symbol | |
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| ID | 3936252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3855820 |
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| End bp | 3856845 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906150 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_511714 |
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| Protein GI | 89056263 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACACT TCAATAGCCG GAACTCATTC GTTATGGCGG CGGCAGTTGC CGGCATCGTG
CTTGGGGGCG CTGCAAATGC CCAAACGTCG ATCCGCGTCG CTTCCTTCAC GCCTGAGGGT
GCCGTTGGCG TCCAGAACGT GATGATCCCC TGGATGGACG CCGTGCAGGA GGAGCTTGGC
GACAGTGTCG AAATGATCCC CTTCTGGGGC GGTGCGCTTG GACCAAGCCC GTTCGAACAA
TATGATCTGG TGCGCGACGG CGTTGTTGAT GTGGCGTGGG TCCTGCCCGG TTATACGCCG
GGCCAATTCA CCCAGCTTCA GGTGACGGAA TTGCCGTTCA CCGTATCCTC CGCGGAAGAG
GCGTCCGTTG TCGGTTGGCG GCTATATGAG ACTGGCCTTC TGGGCGGTCT GGACGACGTC
CACGTGCTGA CAGTCTGGGC CCCGGACGTG ACCAACATTC ACCTCACCGA TCCGGTCACC
TCGCTGGAGG AACTGGATGG GACATCACTG CGCACCGCTG GGGCGACGCA GGCGATTTTC
GTCGATGCCA TCGGCGCGGC CCCGCAGACG CTTGGCTCGA CCGAGGCGAA CGAGGCGATG
GGCCGGGGCA CCATCGACGG CCAGCTTCAG GGCTGGACCG GGATGAACAC ATTCGGCGGT
TTTGCTGTGT CGAACGGCGC GTACCGTGTC CCCCTCGGGG CCTCGCCGTT CCTGCTGTTG
ATGAACCTTG ACCTGTGGGA AAGCCTGTCG GCCGAACAGC AAGAGGTCAT GATGCGCCAT
GCCGGAGAGG AATTGGCCCG TGCCGGTGGT CAGGCCTATG ACGAGATCAC CCTTGGGATC
ATCGAGAGGC AGCGCGAAGC GGGCTACGCG ATTGCGGAAG CCGACGAGGC CGAAATTGCT
GCGTATCAGG CGGCCTATCC CGACATTTAC GATCAGTGGG TTGCGGCGAC AGAGAATGGG
GCCGAGGTGC TGGCAGCCTT TCAGGGCCTG ATTGAGGATT ACCGCGCCGA GACTGCCTCT
CAATAG
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| Protein sequence | MTHFNSRNSF VMAAAVAGIV LGGAANAQTS IRVASFTPEG AVGVQNVMIP WMDAVQEELG
DSVEMIPFWG GALGPSPFEQ YDLVRDGVVD VAWVLPGYTP GQFTQLQVTE LPFTVSSAEE
ASVVGWRLYE TGLLGGLDDV HVLTVWAPDV TNIHLTDPVT SLEELDGTSL RTAGATQAIF
VDAIGAAPQT LGSTEANEAM GRGTIDGQLQ GWTGMNTFGG FAVSNGAYRV PLGASPFLLL
MNLDLWESLS AEQQEVMMRH AGEELARAGG QAYDEITLGI IERQREAGYA IAEADEAEIA
AYQAAYPDIY DQWVAATENG AEVLAAFQGL IEDYRAETAS Q
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