| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3760 |
|---|
| Symbol | |
|---|
| ID | 3936240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3841981 |
|---|
| End bp | 3842613 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637906138 |
|---|
| Product | 3-isopropylmalate dehydratase, small subunit |
|---|
| Protein accession | YP_511702 |
|---|
| Protein GI | 89056251 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGGCT GGACGATCCT TGAGGGCAGA GCCACGGCGC TGGACCGCGA CAGCGTCGAC
ACGGACCAAC TTATCCCCGC GCGCTTCATG TCGACCCCGC GCCGTGAGGG ATATGGCCGG
TTCCTGCTGC ATGATCTGCG CTTCGATGCC GGTGGCAAAG AGGTGCTCAA GGTTGAGCAG
GGGGCCAAAA TATTGATATC ACGCAGAAAC TTCGGAAGTG GGTCATCGCG CGAAGCCGCC
GTTTACGCCC TTGTCGATTT CGGCATCCGC GCGGTCCTGG CCCCAAGCTT TGGCGATATC
TTCGCCTCCA ACGCTGTCAA CAACGGCCTG TTGCCCGCCC GGATCACCGC CAGCGATTGC
GATGCCCTGA TCGCCGACAT GGCGGGAGAG GGCGCAGAGG GGCGGATTGA CCTGGCGCAA
AGCACGGCCC GGATTGGCAC CCGCGACATC GCCTTCGACC TGGACCCCGC ATGGCGCGAA
AAACTGATCA ACGGGTGGGA CGATATCGAC CTGACCGGAC AGCACGCGGA GGCCATCGCG
GCCTTCCGCG ACACACACAT GCGGCACAGG CCCTGGGCAC TGCCACGGGG CGCGGCACGG
GCCGACACCG AGACGACCGA AACCACGAGA TAA
|
|---|
| Protein sequence | MKGWTILEGR ATALDRDSVD TDQLIPARFM STPRREGYGR FLLHDLRFDA GGKEVLKVEQ
GAKILISRRN FGSGSSREAA VYALVDFGIR AVLAPSFGDI FASNAVNNGL LPARITASDC
DALIADMAGE GAEGRIDLAQ STARIGTRDI AFDLDPAWRE KLINGWDDID LTGQHAEAIA
AFRDTHMRHR PWALPRGAAR ADTETTETTR
|
|---|
| |