| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3759 |
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| Symbol | |
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| ID | 3936239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3840930 |
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| End bp | 3841940 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906137 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_511701 |
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| Protein GI | 89056250 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGC AACTACTTGC CGGCGCTGTC GCCGGGGCCG CCATGATGGG CACCGCGGTT
CACGCGCAGC AGACGATCAC AGCGGTTCAT GCGTTCCCCG AAACGCTGGT CTACACCCAG
AGTTTTCTGT CTTTCGTTGA TGCCGTCAAC GAGGCGGGCG AGGGCGTGAT CCAGATCGAG
GTGCGCGGCG GTCCCGAGGC CATCGGCATG TTCCAGCAAC CCGACGCCGT ACGCGATGGG
ATCGTGGATA TGGTCTACAC GCCCGGATCG TTCTACGGCG GCACCGTGCC GGAAAAGGAT
GCGCTGGTCG CCTCGAACCT GACCGCCATC GAGACCCGTG AAAACGGCGG TATCGAGCTG
ATCGACCAGA TCCACCGCGA GCGGATGGGT GTGATGTATC TGGGCTGGTT CGACAGCGGC
GTTTGCTACA ACCTCTGGAC CCGGGACGCG CCGACCTTCG ACGCCGACGG AAACCTTGAG
GTCGAGGGCC TGCGCCTGCG CGGCAACGCC GTCTACAACG CGTTTTTCAC CAATTACCTT
GAGGCGCAGG TGATCGACCT GCCCACGGGC GATGTCTACA GCGCGTTGCA GAACGGCGTG
GTGGATGCGA CCGGCTGGAC GCAAATCGGC CTGATCGACC TGCGCTGGAA CGAGTTCCTC
AACTACCGGA TCGAGCCGTG CTTTTTCTCG ACCGATCTGG GTGTCATCAT CAACCTGGAG
ACCTGGGACG GGCTGACACC CGAGGCCCAG CAGATCCTGC AAGACACCGC GATCCAGCAT
GAGATCGATA GCGTGAACGC CCTGCGGGCG CAGCGGGATG AGGATTTCGC CGCCCTTGAT
GAGCAGGGCA TGGAGGTTGT CGAGCTGGAG GGTGAGGCCC GCGCCAACTA CCTTGCCGCC
GCCCGCGAAA CCACGTGGGA GCGGATGCGC GAGTTGATGG AAGCCGATCC GGCCGACGCC
TCGGATTACG ACACGCTGAT CGGGTTGTTC TACGACCCCG CTGCGGACTG A
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| Protein sequence | MKMQLLAGAV AGAAMMGTAV HAQQTITAVH AFPETLVYTQ SFLSFVDAVN EAGEGVIQIE
VRGGPEAIGM FQQPDAVRDG IVDMVYTPGS FYGGTVPEKD ALVASNLTAI ETRENGGIEL
IDQIHRERMG VMYLGWFDSG VCYNLWTRDA PTFDADGNLE VEGLRLRGNA VYNAFFTNYL
EAQVIDLPTG DVYSALQNGV VDATGWTQIG LIDLRWNEFL NYRIEPCFFS TDLGVIINLE
TWDGLTPEAQ QILQDTAIQH EIDSVNALRA QRDEDFAALD EQGMEVVELE GEARANYLAA
ARETTWERMR ELMEADPADA SDYDTLIGLF YDPAAD
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