| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3757 |
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| Symbol | |
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| ID | 3936237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3839056 |
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| End bp | 3840363 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906135 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_511699 |
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| Protein GI | 89056248 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.310199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGT ACGAGGCCCT TGCCCTGCTG GTCGGCAGCA TCATGGTGCT GATGGCCGTG
GGTATGCCCG TGGCGCTGGC ATTTCTGGCC GCGAATATCA TCGGGGCCTG GGTGTTCATG
GGTGGCGAAC GGGGCGTGGT GCAGCTTCTC AACAATGGCT GGGGCGGGCT GACAACCTTC
GCGCTGGTGC CGATCCCGCT GTTTTTGCTG ATGGGTGAGA TCTTCTTTCA GACCGGCCTT
GGGGCACGGA TGTTTTCGGC GATCGACCGG TTGTTGGGCC GCCTGCCGGG GCGGCTCAGC
TATGTCACGG TGCTGGGGGG CACCGGATTT TCGACACTGT CGGGCTCGTC CATGGGATCC
ACCGCCCTTC TGGGCTCGCT GATGGTGCCC GAGATGGGGC GGCGCGGGTA CAAGAAGCAC
ATGTCCATCG GCCCGATCCT GGGCACCGGG GGGCTTGCGA TCATCATTCC GCCGTCGGCC
TTGGCGGTTC TGTTGGCGAC ACTGGCGCAG ATTGATGTGG GCGCGCTGCT GATCGCGGGG
GTGATCCCGG GGCTCATCCT CGCGGGCTTC TACATCGCGA CAATCTACCT TCAGACCCGG
TTGGACCCCG AGGCCGCGCC GCCCTACGAC GTGGAGGCGC AATCCGTCGG GGCCAAGCTG
ATCCTGTTGA TGCGCGACGT GGTGCCGATG ATCGGCCTGA TGGTCCTGAT CGTGATCCTG
ATGATCACCG GGTTCATGAC ACCGTCCGAG GCGGCGGCCT TCGGCGCGCT TGGCGTGCTG
ATCCTGGCCG CCTGCTACCG CTGCCTGAAC TGGGAGGCGA TGGTGAAATC CGTGCGCGGC
GCGTTGCGGG TGACGTTGAT GGCCTACCTG ATCGTCTTCG GGTCGGCCAC GTTCAGCCAG
TTGCTGGCGT TTTCGGGCGC ATCGCGGGGG TTGATCACCT GGGCCACGGG GTTCGATCTG
GACCCGATCA TGATGCTGCT GGTGATGTTT GCGGTGCTGT TGGTGCTGGG GATGTTCATG
GAGCAGATTT CCATCATGCT GCTGACGGTC CCGATCTTCT TTCCGCTGGC CACGCAGCTG
GGCTTTGATC CCATCTGGTT CGGTCTGATC ATGTTGCTGG CGCTGGAGAT CAGCTTCACC
ACCCCGCCAT TCGGGCTGCT GCTGTTCGTG ATGAAGGGCG TCGCACCGCC CGACACCACC
ATGCGCGAGA TCTACCGCGC GGCGATCCCG TTCATCCTGT GCTCGCTGAT GGTGGTGGCC
CTGCTGATCG CCTTCCCGAT GCTCGCGACA TGGTTGCCGG GGATCTGA
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| Protein sequence | MEWYEALALL VGSIMVLMAV GMPVALAFLA ANIIGAWVFM GGERGVVQLL NNGWGGLTTF
ALVPIPLFLL MGEIFFQTGL GARMFSAIDR LLGRLPGRLS YVTVLGGTGF STLSGSSMGS
TALLGSLMVP EMGRRGYKKH MSIGPILGTG GLAIIIPPSA LAVLLATLAQ IDVGALLIAG
VIPGLILAGF YIATIYLQTR LDPEAAPPYD VEAQSVGAKL ILLMRDVVPM IGLMVLIVIL
MITGFMTPSE AAAFGALGVL ILAACYRCLN WEAMVKSVRG ALRVTLMAYL IVFGSATFSQ
LLAFSGASRG LITWATGFDL DPIMMLLVMF AVLLVLGMFM EQISIMLLTV PIFFPLATQL
GFDPIWFGLI MLLALEISFT TPPFGLLLFV MKGVAPPDTT MREIYRAAIP FILCSLMVVA
LLIAFPMLAT WLPGI
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