| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3744 |
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| Symbol | |
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| ID | 3936224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3825009 |
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| End bp | 3825923 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637906122 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_511686 |
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| Protein GI | 89056235 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.756049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAC TAGCTGAAAT CGAATGCTTC ATCGCGGTCG TGGACGCGGG GTCGCAGCTT
GCAGCGTCCA AGACGATGAA CATCGCAGTC TCGGCCATTC ACCGGCGCAT CAAAGATCTT
GAGGCGCGGC TTGGCGTCAC CCTGACCCGC CGGACGTCCC ACGGTACGGC GCTGACACCG
GAGGGTCGCG CTTACTACCA GCGATGTGTG AGCGTCGTGG CGGACCTGAA TGAAGCGGAT
GCCCGCGCCA CCGGCGAGTT GCACAAGGCG TCTGGCTTGA TCCGGATGAC GGTTCCAATC
GCATTTGGCA CGCGGCATCT TGCGCCGATC ATGACCAGCT TCTCAGCCGA GCATCCGGAC
ATTCGGTTTG AGTTGAACAT CAGCGATCAC CACGTGGATC TGCTTGAGGA TGGCTATGAT
CTGGCCATCC GGATTGGCGG CGACCAGAAA CCGCAACTGG GCGCGGTAGA GCTGTTCAAG
GTTCAATATG CCCTCACCGC GAGCCCGGCT TTTTGGGAAA CACATGGCCT TCCCCAATCC
CCCGAAGACT TGGTCGGTCT CCCGACGTTG GTGTACCGCG CGGGGGCCGT GCCGTCTTAC
TGGCCGTTTC GAAACAAGGC GGGGGAGGTG TCCAAAATCC CGATACAGCC CCGCTACATT
GCGAACAATG GCGAGTTCTT AGTTGAAGCC GCGAAGGCCG GTCTGGGCGT GTCGCTGGAG
CCAACATTCG TATGTGGCGA AGCGTTGCAA GCAGGTAAGT TGGTCGCCGC CCTTACAGAA
TATGATACGT TCGACAGAGC AGCGCAGATC GTGACACCTG CCAATCGCCC CCTGTCGTTC
CGGGTGCGAG AGTTTTTGGG AGTTTTGCAA ACTGAGCTAT CCCAGCCGGG TCGATGGAAT
GTGGTGCAAA CTTGA
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| Protein sequence | MNRLAEIECF IAVVDAGSQL AASKTMNIAV SAIHRRIKDL EARLGVTLTR RTSHGTALTP
EGRAYYQRCV SVVADLNEAD ARATGELHKA SGLIRMTVPI AFGTRHLAPI MTSFSAEHPD
IRFELNISDH HVDLLEDGYD LAIRIGGDQK PQLGAVELFK VQYALTASPA FWETHGLPQS
PEDLVGLPTL VYRAGAVPSY WPFRNKAGEV SKIPIQPRYI ANNGEFLVEA AKAGLGVSLE
PTFVCGEALQ AGKLVAALTE YDTFDRAAQI VTPANRPLSF RVREFLGVLQ TELSQPGRWN
VVQT
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