| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3736 |
|---|
| Symbol | |
|---|
| ID | 3936216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3819336 |
|---|
| End bp | 3820349 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637906114 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_511678 |
|---|
| Protein GI | 89056227 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGA TATTTGAACT TAGCCGCGAA AAGCCCGTCA GGCGGGTGGA GGCTTGGCAA
GATATCGTGT CCAGGACGTT TGTGACGCTG GCCTGCGATC TTCCGGACAA AACTGACGTA
ACCGGGTCCA TCGCCTCCAT CGGAAACGGG CCGATATCCG CCAGCCTCGT GGATTCCGTG
GCCCAAACTG TGGATCGAAC GCGCCGGCTG ATCCGGCAAG ATGATGCCGA GGTTGCTCTC
ATCAGTTTTC AGATTGAGGG GGAGTGCCTT CTTCAGCAGC GTGACCGTCA GGTGCGCTTG
CGACCGGGAG ACTTCACGAT CTACGACAGC ACCAGCCCCT ATGATCTGCA GTTTGAGGAG
GACTTCTGCC AGCTCGTCCT GCACATGCCG CGCGACCTGT TGCGACGCCG GTTGGGGCCT
GTGCGTCAGA TCTGCGCGCA ACGGTTTGGT TCAGATACCG GGGCCAATTC CTTTGCAGGT
GCCTATCTGA AACAGATCGC TCTGCAATTG ACGTCTCTGG AGACCGCCAC CGCCGAGCAT
CACATCAAGA CAGCTTTGGA TCTGGTTGGT TACGCTGTGG AGCAGAACGT TCAGCCCTGC
GGCCATGATG TGAGGCGACA GTCCGCCGCG ATCCGAGAGC AGGTCGCACA GGTTATCAGC
AAGCACTTCC GTGATGATCA ACTGTCGACG CCCTCACTCG CACGAGCTGT CGGCATCTCC
TCCAGACGCC TGCAGGAGGT CTGTGCAGAG GTCGGAACCA CTCCCATGAA CGCGATCTGG
GATATCCGGC TGGAAAAGGC ATCTGACATG CTCCGAAGCC CCGCATTCGC GCATCTGTCC
ATTACGGACA TCTGCTTTGC CTGTGGCTTT GGAGACTCGT CGCAATTCAG TCGAAGATAC
AAGACGATGT ACGGCGTTAC ACCAAGAGAG GACAGAAAAT CCGGATATCG TAACGGGTTC
AGCGGTTCAG TGCAGACTCT TAGCAAAAGC GCGGGTCGCT TTCAGAGACG ATAG
|
|---|
| Protein sequence | MAQIFELSRE KPVRRVEAWQ DIVSRTFVTL ACDLPDKTDV TGSIASIGNG PISASLVDSV
AQTVDRTRRL IRQDDAEVAL ISFQIEGECL LQQRDRQVRL RPGDFTIYDS TSPYDLQFEE
DFCQLVLHMP RDLLRRRLGP VRQICAQRFG SDTGANSFAG AYLKQIALQL TSLETATAEH
HIKTALDLVG YAVEQNVQPC GHDVRRQSAA IREQVAQVIS KHFRDDQLST PSLARAVGIS
SRRLQEVCAE VGTTPMNAIW DIRLEKASDM LRSPAFAHLS ITDICFACGF GDSSQFSRRY
KTMYGVTPRE DRKSGYRNGF SGSVQTLSKS AGRFQRR
|
|---|
| |