Gene Jann_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3718 
Symbol 
ID3936198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3804384 
End bp3804875 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID637906096 
Productputative monovalent cation/H+ antiporter subunit E 
Protein accessionYP_511660 
Protein GI89056209 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGAC GCCTTGTCCC GCATCCCTTG CTCAGCCTGA TGCTGATCCT CGTCTGGCTT 
GGCTTGGTGA ACACAGTCAC CCTGGGTAAT CTGATCCTTG GCACCAGCTT CGGGCTCATA
ATCCCGATGC TGACGGCGGC CTATTGGCCG GATCGTCCGG CCCTTGCCCG GCCACTGAAG
GCCGTGGAGT ACGTGTTGGT GGTGCTTTGG GATATCATCG TAGCCAACGT CCAAGTCGCC
GCGATCATCT TGTTCAAACG CGAGAACACG ATCAAATCGC AATGGATCCC GATCCCGCTC
GAGCTCTCCT CGGCTGAGGC GATTACCGTC CTTGCGGGCA CAATCACAAT GACCCCGGGG
ACGGTCTCGG CGACGTTGGC CGCCGATGGC CGCGCCATCC TGGTGCATTG CCTGCATACC
GATGATCCCG ATGCGATCCG GGACGAAATC AAGTCCCGGT ACGAGCGCCG CCTTTTGGAG
ATTTTCCCAT GA
 
Protein sequence
MVRRLVPHPL LSLMLILVWL GLVNTVTLGN LILGTSFGLI IPMLTAAYWP DRPALARPLK 
AVEYVLVVLW DIIVANVQVA AIILFKRENT IKSQWIPIPL ELSSAEAITV LAGTITMTPG
TVSATLAADG RAILVHCLHT DDPDAIRDEI KSRYERRLLE IFP