| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3717 |
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| Symbol | |
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| ID | 3936197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3802762 |
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| End bp | 3804381 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906095 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_511659 |
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| Protein GI | 89056208 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.95628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTGGA TCATTCTTCC TGTCGTCCTG CCCGCCATGC TGGCGCCGCT GATCGCCTTC
GCGATGCGAC ACGACATCAC CTTGGCCCGC ACGGCCTCAG TCGCAGGCAC GTCTATTCTG
CTGGCGATCG CGCTTGGTCT CGCGGCCCTT GCGGCGGACG GCACGACCCA TGTCTACAGG
CTGGGGGATT GGCCCGCGCC GTTCGGCATT GTCCTGGTGC TCGACCGCCT GTCGGCCCTG
ATGGTGCTTC TGACCTCGAC CCTGGCGATG GTGGTTCTGG TCCATGCGAT CACGACCGGT
TGGGACGCGC GGGGGCGTCA TTTCCATGCC TTGTTTCAGT TTCAGCTCAT GGGCATTTGC
GGCGCATTCC TGACCGGCGA CATCTTCAAC CTCTTCGTGT TCTTCGAGGT CTTGTTAATC
GCCTCCTATG GCCTGATGAT CCATTCCGGC GGGAAGGCAC GGATGCGGGC GGGCCTGCAA
TATGTGGTCA TGAACCTGGC CGGATCGACG CTGTTCCTGT TTGCTCTGGG CACGCTCTAT
GCCTCGACCG GAACGCTTAA CATCGCAGAT CTGGCCGTGC GTATCGCTGA GGTCCCGGTG
GAAGAGGCAG CCCTTGTCCG CGTGGCGGTG ATCTTGCTGC TGATCGTCTT TGCGGTGAAA
GCCGCGCTTT TCCCGGTGCA ATTCTGGCTG CCCGCCACCT ACGCCAACGC CCCTGCGCCT
GTGGCTGCCC TGTTTGCGAT CATGACCAAG GTGGGCGCCT ACGCGATCCT GCGAATTCAC
ACGACGGCCT TCGGGCCGGG CATCTCTGCC ACGGAAGATC TGGCCGCGAC GTGGCTGTTC
CCGGCGGCCA TCGTAACGAT CGCCGTGGGA GCGATTGGCG TGTTGGGCGC GCGCCGTCTG
ATGCCCTTGA TCGCGTTTTC GGTTGTAGGC TCCATGGGAA CCTTGCTGGT GGCTGTTGCG
GTCTTCTCGC AAACCGCAAC GCTGGCGGCG CTGTACTACA TGGTCCATTC GACTTTCGCG
GCTGCTTGCC TGTTCCTCGT GGCCGACCTG GTCGTCACAC GCCGCGCCAC GGATAGCCTC
CAGCCAGAGC CGCCCACGGT CCAGAACGGC CTTTGCGCGG CGCTGTTCTT TGCCGCCGCA
ATCGCCATGG CGGGCATGCC ACCGCTCAGC GGCTTCCTCG GAAAACTGCT TGTCCTCGAC
GCCCTGCGGG AGCCGGGACT GATTGGATGG GCCTGGTCCA CGATCCTAGT CGGGTCGTTG
CTGACCATCG TGGGCTTCGC ACGGGCGGGT AGCATCCTGT TCTGGAAATC GACGGCCACG
GTGGGGCCTG CGGATGACAA CGCCGACCCA GAGGCAGACC AAACTGATGC CCCGGCGCAG
CCCGTACCGG CAACGGCGGG ACAAGTTGCC CCAGCCATGG TTGCCTTGGC CGGGCTCGCA
GCACTCGCGG CTTTCGCGGG GCCCGTCACC GCCTATCTGG AAGGGACGTC CGAGCAATTG
TTTGACCGCG CAGGCTACGT CGACGCCGTC CTGATCCCGA TTGAACCTGA GGCTGCGGCG
GACGCGACCG GTTATGGTAG TGAAGACCTT CACGGGGAAC ACGACGAGGA GGAGCACTAG
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| Protein sequence | MHWIILPVVL PAMLAPLIAF AMRHDITLAR TASVAGTSIL LAIALGLAAL AADGTTHVYR
LGDWPAPFGI VLVLDRLSAL MVLLTSTLAM VVLVHAITTG WDARGRHFHA LFQFQLMGIC
GAFLTGDIFN LFVFFEVLLI ASYGLMIHSG GKARMRAGLQ YVVMNLAGST LFLFALGTLY
ASTGTLNIAD LAVRIAEVPV EEAALVRVAV ILLLIVFAVK AALFPVQFWL PATYANAPAP
VAALFAIMTK VGAYAILRIH TTAFGPGISA TEDLAATWLF PAAIVTIAVG AIGVLGARRL
MPLIAFSVVG SMGTLLVAVA VFSQTATLAA LYYMVHSTFA AACLFLVADL VVTRRATDSL
QPEPPTVQNG LCAALFFAAA IAMAGMPPLS GFLGKLLVLD ALREPGLIGW AWSTILVGSL
LTIVGFARAG SILFWKSTAT VGPADDNADP EADQTDAPAQ PVPATAGQVA PAMVALAGLA
ALAAFAGPVT AYLEGTSEQL FDRAGYVDAV LIPIEPEAAA DATGYGSEDL HGEHDEEEH
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