Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3714 |
Symbol | |
ID | 3936194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3798880 |
End bp | 3799350 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637906092 |
Product | nuclease (SNase-like) |
Protein accession | YP_511656 |
Protein GI | 89056205 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.551485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAGT TAGAGTTGAG CGTTTTTGCG ATGGCAAGTA ACACCATAAA CATGCGGCTG ATTGCAGGTA CGGCCCTGTT TTCGGCAATG TCAGATAGCG CTTTTGCGGA GCGGATCACT GGTCCTGCAT ATGTGCGTGA CGCCGACACG ATTGTAATCT CAAGGACAGA AATTCGCCTG TACGGTGTCG ATGCCCCAGA ACTCTACACT CGTTTTGGCC GGCTAGCAGC TACTTTCTTG CATGACTTAC TCCAAGGCGA AACCGTGCGG TGCGATGTCG AGAATGCGTC AATGCGGCAG CCACTGCTTG GAACCTGCTA CATTGAAGTC GACGGAAACA ACTTAGACAT AGCTGCGATC TTAGTTTCTG TTGGTCATGC ATTGGATTGC CAAGCAATAT CGGGAGGGCG TTACAGAAAT CTTGAGCAAC CGGACGTTAG GTCGCGCTTC ACTCCTGCAG AATACTGTTG A
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Protein sequence | MRQLELSVFA MASNTINMRL IAGTALFSAM SDSAFAERIT GPAYVRDADT IVISRTEIRL YGVDAPELYT RFGRLAATFL HDLLQGETVR CDVENASMRQ PLLGTCYIEV DGNNLDIAAI LVSVGHALDC QAISGGRYRN LEQPDVRSRF TPAEYC
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