Gene Jann_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3714 
Symbol 
ID3936194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3798880 
End bp3799350 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content51% 
IMG OID637906092 
Productnuclease (SNase-like) 
Protein accessionYP_511656 
Protein GI89056205 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.551485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAGT TAGAGTTGAG CGTTTTTGCG ATGGCAAGTA ACACCATAAA CATGCGGCTG 
ATTGCAGGTA CGGCCCTGTT TTCGGCAATG TCAGATAGCG CTTTTGCGGA GCGGATCACT
GGTCCTGCAT ATGTGCGTGA CGCCGACACG ATTGTAATCT CAAGGACAGA AATTCGCCTG
TACGGTGTCG ATGCCCCAGA ACTCTACACT CGTTTTGGCC GGCTAGCAGC TACTTTCTTG
CATGACTTAC TCCAAGGCGA AACCGTGCGG TGCGATGTCG AGAATGCGTC AATGCGGCAG
CCACTGCTTG GAACCTGCTA CATTGAAGTC GACGGAAACA ACTTAGACAT AGCTGCGATC
TTAGTTTCTG TTGGTCATGC ATTGGATTGC CAAGCAATAT CGGGAGGGCG TTACAGAAAT
CTTGAGCAAC CGGACGTTAG GTCGCGCTTC ACTCCTGCAG AATACTGTTG A
 
Protein sequence
MRQLELSVFA MASNTINMRL IAGTALFSAM SDSAFAERIT GPAYVRDADT IVISRTEIRL 
YGVDAPELYT RFGRLAATFL HDLLQGETVR CDVENASMRQ PLLGTCYIEV DGNNLDIAAI
LVSVGHALDC QAISGGRYRN LEQPDVRSRF TPAEYC