Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3712 |
Symbol | |
ID | 3936192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3796575 |
End bp | 3797585 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637906090 |
Product | transcriptional regulator |
Protein accession | YP_511654 |
Protein GI | 89056203 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.990015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA AAACAACCGT GATCGGATCA CCACTCGCCG GAACGTCTGT TCTGTTTTGC ATCCTCGACG TCCTCGCGTC CGTAGGGCGA GACTGGGAGA TGTTGCATGG GCTGCCTGCT CAGGTGCCGG TCTTCCAAGT CAGCCTCAGA ACCGCTGACG GCGCGCCCTA TTGGGATGTG AACGGACGCA AAATTACGCC CGACGCAAGG CTCGATGAAG ACCCTGCACC GGACCTCATC ATCGTGCCGG ACATGCACTT TGATCCCAAC GCCGGGTTTC CCGAGGACTA TCGAAAGATG GCGAACTGGC TCGTCGCGGC GTATGAGCGC GGCGCCATCG TGACGTCCGT CTGTTCCGGG GCGGTTCTGC TGGGTGCGGC TGGGTTGCTC GACGGCAAGG AGGCCACCAC ACATTGGGGC TATGCGGAAA TGCTAGGCCG CAATTTCCCC GACGTGAAGG TTTGTCGAGA ACGCATCTTG GTGCCCGCCG GTGAGGGCCA TAGGGTCGTG ACCGCAGGCG GCGTCTCGGC TTGGGCCGAT TTGATGCTCT ATCTCATTGC TCGGTATGCA GGCACAGACG AAGCCCGGCG CATTGCCAAG ATCTACCTGA TCGACCCGCA CAGCGAAGGG CAGTTGACCT ATGCCTCGCT TACGTCGGGT CGCCAACACG ACGACCAATT GATTGCAAAG GCCCAAGTTT GGGCTGCACA GAACTACGAT GCATCAAGTC CGGTTGCTGC CATGGCCGAA CAGGCCCACA TGACTGAGCG TGGTTTTCTG CGTCGGTTCA AGAAGGCAAC GGGACAGGCC CCGACGGATT ACATTCAGAC TCTCCGGATC GAAGAAGCAA AGCAACTGCT GGAAACGACC GCCATGCCAA TCGAGGATAT ATCGACCGAG GTCGGTTATT CCGAGCCGTC AAGTTTCCGC GCCGCATTTC GAAAGCGCGT TGGGATATCG GCATCTGCCT ATCGCAAGAA ATGGCACGCC TTGGCGCCGA CAGGGTTATG A
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Protein sequence | MSIKTTVIGS PLAGTSVLFC ILDVLASVGR DWEMLHGLPA QVPVFQVSLR TADGAPYWDV NGRKITPDAR LDEDPAPDLI IVPDMHFDPN AGFPEDYRKM ANWLVAAYER GAIVTSVCSG AVLLGAAGLL DGKEATTHWG YAEMLGRNFP DVKVCRERIL VPAGEGHRVV TAGGVSAWAD LMLYLIARYA GTDEARRIAK IYLIDPHSEG QLTYASLTSG RQHDDQLIAK AQVWAAQNYD ASSPVAAMAE QAHMTERGFL RRFKKATGQA PTDYIQTLRI EEAKQLLETT AMPIEDISTE VGYSEPSSFR AAFRKRVGIS ASAYRKKWHA LAPTGL
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