Gene Jann_3708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3708 
Symbol 
ID3936188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3792397 
End bp3793101 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content57% 
IMG OID637906086 
Productmethyltransferase type 12 
Protein accessionYP_511650 
Protein GI89056199 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.434714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.86743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGG ACCGACAGCC AAAAGCGAAC GAGCGCAGAC ATGATCGCCT CGCAATGTAT 
CGGGCGATGC GAGACAGTGT TCCCGGTCTT GATGCAATGT ATTGGGTCAT GAGCGCTCTG
GTCGCGAGCT ACGCCGAGGC GCGGGCACGT GTTCTGATCG TGGGTGCCGG CGGCGGGCGT
GAGATCGAAA AATTGCTGCA AAACAACATC GCGGTGGAGA TCACGGCGGT TGATCCGTCC
GCAAGGAACC TTGAAACAGC GAGGCTGGCA GCCGAGGCAT GCCCATCAAA AAGCAATGTT
ACTTTCATAG CTGGTAAAGC TGAGGATCTT CCGCGCGGGT CTTCCTTCGA CGTCGCGACA
TCCCTCCTTG TGATGCACCA TATCTCTGAC GACGGCGCAA AGCTGGCCTA TTTAAGGAGC
ATTCGGGACC GATTGGTCCC CGGAGGGTTG CTTATCCATG CCGATGTGTG TGTCGCCAGG
GTGGAAGACT TTGATCATCT GATCCCAGCG TACCGTAAAT ATGCACAACA CGTCGGAACT
TGCCCCGACG CGACGCGTCT TGAACTCGAA GCGATTGCGC AACTACCGGT GGCGTCGGAC
GAACGGACCC GAGCCCTTTT TTCGGAAGCT GGACTTATCG AGCCGCAAGA GGTGTTTCGA
ACACTCTGGT ATCGATGCTG GATCAGCAAG CGCAACCCGC CGTGA
 
Protein sequence
MTTDRQPKAN ERRHDRLAMY RAMRDSVPGL DAMYWVMSAL VASYAEARAR VLIVGAGGGR 
EIEKLLQNNI AVEITAVDPS ARNLETARLA AEACPSKSNV TFIAGKAEDL PRGSSFDVAT
SLLVMHHISD DGAKLAYLRS IRDRLVPGGL LIHADVCVAR VEDFDHLIPA YRKYAQHVGT
CPDATRLELE AIAQLPVASD ERTRALFSEA GLIEPQEVFR TLWYRCWISK RNPP