| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3698 |
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| Symbol | |
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| ID | 3936177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3780422 |
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| End bp | 3781384 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637906075 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_511640 |
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| Protein GI | 89056189 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.799138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCGG TGGTGCTGAA AGGGGTCACG CTGCGCGGGT TGGAGGTGTT CGAGACGTTG
GCCCGCACCG GGTCGGTCGC CGCAACGGCC GCCGATCTGG GCATGAGCGC GCCCGCCGTA
TCACAACAGA TGAAGAACCT GTCGACCGCA TTGGGCGTCG ATCTGGTCGA TGCGTCGCGC
CGCCCGATGG TGGTGACGCC CGCCGGACGG CTGTTTCTGG TCAAGGCGAA GGAGGCGTTG
CGGGCGCTGC GGGCAGGTCA ACGGGATCTG AAAGCGCTGG ATCTGAGCGA TATGGAATCG
CTGTCGCTGG GGGTGATCGA AGATTTCGAG AACGAGGTGA CGCCACTTCT GGCGACGCGT
CTGGCCGAGG CGATGAGCCA ATGCGCCTTT GTGTTGCAGA CCGGCGCGAG CCACGTCTTG
CAGGCCCGCA TCGCCGCGCG CGAGCTGGAC ATGGTGATCT GTGCCGCCGG TGACGTCGCG
CCGCGGGGCA CGATTGCGCT GCCGTTGCTG GATGACCCCT ATATTCTGGC CGTTCCCAAA
GGGGTGTCGG TCAGCCGGGG GCTGGCGTCG CTGAGCGATC TGCCGTTCCT GCGGCGCGAT
CTGGATCAGG TGATGGGCCA ACAGATCGAG GCGTATCTGG AGCGGGCGGG CCAGACCCCG
CCCCGGCGGT TTGAGATGGA TTCCAATCAA TCGATTTCAG CGCTGGTGGC CGCAGGGACT
GGCTGGACCA TCACCACCGC GCTGTCGCTT GCCCGGGCCG GACGATTTGC CAGCGGGATT
GAGGCGCATC CCCTGCCCGG GGAGGCGATG GCTCGCCAGA TCGTGCTTTA TGCCACGTCC
GATTGGGCCG GGGGCATTCC GGACCAGATC TCGGACCTGG CGCGCGAATT GATCGGGCTG
CATTTCACGG ACCCGGGGCT GGAGCAAATG CCCTGGCTTG GCAGTCAATT TCGAGTTTTG
TGA
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| Protein sequence | MSPVVLKGVT LRGLEVFETL ARTGSVAATA ADLGMSAPAV SQQMKNLSTA LGVDLVDASR
RPMVVTPAGR LFLVKAKEAL RALRAGQRDL KALDLSDMES LSLGVIEDFE NEVTPLLATR
LAEAMSQCAF VLQTGASHVL QARIAARELD MVICAAGDVA PRGTIALPLL DDPYILAVPK
GVSVSRGLAS LSDLPFLRRD LDQVMGQQIE AYLERAGQTP PRRFEMDSNQ SISALVAAGT
GWTITTALSL ARAGRFASGI EAHPLPGEAM ARQIVLYATS DWAGGIPDQI SDLARELIGL
HFTDPGLEQM PWLGSQFRVL
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