| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3696 |
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| Symbol | |
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| ID | 3936175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3778684 |
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| End bp | 3779622 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637906073 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_511638 |
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| Protein GI | 89056187 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.51893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACAATA CGACCCTCCC CTTCACTCTG AGACAGCTCC GCTATCTCGC GGCGCTTGAA
GATATGCGCC ATTTCCGCGA GGCGGCAGAG GCGTGTGGCA TTTCGCAACC GTCCCTGTCG
GTGCAGATCA AATCCCTGGA AGACGCCCTT GGCCTGACCC TGGTCGAGCG TGGCCGCGGC
CCCGTGCGCC TGACCCATGC GGGCCGCGAA GTGTCGCGCC GCGCACGCGA GATCCTGGAC
GCGGGCCAGG GCATTCTGGA CCTGTCGGCG ACACTGCAAT CAGGGTTGGG GGGCACGTTG
CGCATGGGCA CCTCTACCAC GTTGGGGCCC TATCTGATGC CCCATGTGGT GGGCGACCTG
CATCGCTCTC ACCCGGATCT GCGGCTCTAT ATCCGCGAAA ACGCCCCCAG GAATCTGGTG
CGGGAACTCA ATGACGGCAC CCACGATCTG ATCCTGACGC AATTGCCGGT CCAGGGCGCA
CGCCTGACCT CCACGCGTCT GTTCCGGGAA CCTCTGGGCC TCGCGATGCC GGTCGATCAT
GCGCTGTCAG AGGCCAGCAA CATCGACGGG CCGGATCTTG AGGGGCAGTC GATCCTGTCG
CTGTCGCCTG CCTATGCCCT GCATGATCAG ATCAATGCAC TGTGCGTGGA GACCGGCGCG
CAGATGTCCC GGGATTACGA GGGCACGTCG CTGGATGCGC TGCGGCAGAT GGTGGCGCTG
GATATGGGGC TGACGTTTCT ACCCGCGCTC TACGTCCGGT CCGAGATCGA AGGGCGTGCG
CAGGACGTTG TCGTACGACC GTTCCGGGGG CGAAAATTCT TCCGATCCAT CGGGTTGGTC
TGGCGGTCAT CATCGGGCGC GGCCCCGGCA TTCGAGCGGT TGGCGGGCGC GATCCGCGAC
ACCGCGCGTC GCTTCCCGGA ACTGGTTCTG GAAGGTTAA
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| Protein sequence | MHNTTLPFTL RQLRYLAALE DMRHFREAAE ACGISQPSLS VQIKSLEDAL GLTLVERGRG
PVRLTHAGRE VSRRAREILD AGQGILDLSA TLQSGLGGTL RMGTSTTLGP YLMPHVVGDL
HRSHPDLRLY IRENAPRNLV RELNDGTHDL ILTQLPVQGA RLTSTRLFRE PLGLAMPVDH
ALSEASNIDG PDLEGQSILS LSPAYALHDQ INALCVETGA QMSRDYEGTS LDALRQMVAL
DMGLTFLPAL YVRSEIEGRA QDVVVRPFRG RKFFRSIGLV WRSSSGAAPA FERLAGAIRD
TARRFPELVL EG
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