Gene Jann_3693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3693 
Symbol 
ID3936172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3774954 
End bp3775385 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID637906070 
Productputative monovalent cation/H+ antiporter subunit C 
Protein accessionYP_511635 
Protein GI89056184 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTC TCGTCGCGAT TATGGTGGGC GTGCTCGCCG CCGCCGCCGT GCATCTTATG 
CTGGCGCGCA ATGTGTTGCG CTTCCTGTTC GGGCTGATCC TGCTGTCGAA TGCCGCCAAC
CTGACGATCT TCGTCTCGGG TCGGCTGACG CCGGAATCCC CGCCCTTGAT CCCCTATGGA
TCACAGGTGC CGGTGGACGG CGTGGCCAAT GCTCTGCCGC AAGCGTTGGT CCTGACAGCC
ATCGTCATCG GCTTTGGTCT TTTTGCCTTC GCCCTGACGC TGGTCTACCG CGCCTATCAG
AACCTTGGCA CGCTGAATTC TGACGAAATG CGTCTGGCCG AGCCGGTGGA AGACACACCG
TCGGACGCGA AAGCCGTGGC TGAAAAGCAA TACATCGCCC GCGATGCAGC GACCCGGGGG
GCGGATCAAT GA
 
Protein sequence
MELLVAIMVG VLAAAAVHLM LARNVLRFLF GLILLSNAAN LTIFVSGRLT PESPPLIPYG 
SQVPVDGVAN ALPQALVLTA IVIGFGLFAF ALTLVYRAYQ NLGTLNSDEM RLAEPVEDTP
SDAKAVAEKQ YIARDAATRG ADQ