Gene Jann_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3683 
Symbol 
ID3936162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3764414 
End bp3765883 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content64% 
IMG OID637906060 
Productglycerol kinase 
Protein accessionYP_511625 
Protein GI89056174 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.625574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA TCCTCGCCAT CGACCAGGGC ACCACCTCCA CCCGTGCAAT CGTCTTTGAT 
GGGCAGTTGC GGCCAAAAGC CAGCGCCCAG AAGGAATTCA CGCAGCATTT CCCGGCATCC
GGCTGGGTGG AGCATGATCC CAATGAGATC TGGGATACGG TGCTGGAAAC CTGCCGGGGC
GCTTTGGATC AGGGCGGGGA CGTTGCGGCC ATCGGCATCA CCAACCAGCG CGAAACGGTT
GTGGTCTGGG ACCGGCACAC GGGGGAGGTC GTCTACAATG CCATCGTCTG GCAGGATCGC
CGCACGGCGG ATCTGTGCGC CCGGTTGAAG GCCGAGGGGC GTGAACCGAT GATCCAGCAG
AAGACCGGCC TGCTGCTGGA CCCCTATTTC AGCGGGACGA AACTGGCCTG GATTCTCGAC
AACGTCGAGG GTGCGCGGAC CCGGGCGGAG GACGGGGATC TGGCGTTTGG CACCATCGAC
AGCTTCCTTA TCTGGCGTAT GACCGACGGC CAGCGCCACG TGACCGATGC CACGAACGCG
GCCCGCACGC TGCTCTACAA TATTCGCGAT GGCGGATGGG ATCCGGCCAT TTGCGCCATG
CTCAAGATCC CCATGGGTAT CCTGCCCGAG GTTCTCGATT GCGGTGCCGA TTTTGGAGAG
ACCTCGCTGT TCGGCGCGCC GCTGCCGATC CTTGGCGTCG CAGGCGACCA ACAGGCCGCC
ACCGTGGGGC AGGCATGTTT CCAGCCGGGC ATGTTGAAAT CGACCTATGG CACCGGGTGT
TTCGCGCTGC TGAACACGGG CGACACGCTG GTGACGTCGC AAAACCGGAT GCTGGGGACG
ATTGCCTATC AGTTTGACGG CAAGCCGACC TATGCGCTGG AGGGCTCCAT CTTCATCGCG
GGTGCGGTGG TCCAATGGCT GCGCGACGGG CTAAAGATCA TCGACGATGC GCCGCAGAGT
GCCGGGCTGG CGGACGCGGC AGATGCCACG CAGTCCCTTT ACCTCGTGCC CGCGTTCACC
GGCCTTGGCG CGCCCTACTG GGACCCGGAC GCGCGCGGCG CGATATACGG GCTGACGCGC
AATTCAGGCC CCGCGGAAAT TGCCAAAGCC GCGTTGGAAT CGGTGGGTTT CCAGACCCGC
GATTTGTTGG AGGCGATGGC GGCGGATTAC CCCGGCGATA CGGGCAATGT TCGGGTGGAC
GGCGGCATGA CCGCCTCTGA CTGGACGATG CAATTCCTCA GCGACATCCT CGGTGCGCCA
GTGGATCGCC CGCAGGTGCT GGAGACGACA GCCGTCGGCG CGGCCTGGAT CGCGGGCAAC
CGTGCGGGCC TTTACCCGGA CCAAGACGGC TTCGCCGCGT CCTGGGCGCT GGACACAACG
TTCGAGCCGC AGATGGACGC TGCCACACGC GACGCACGAT ATGCGGGCTG GAAGGACGCC
GTCGCACGAA CGTTGTCCGA CCATGGATAA
 
Protein sequence
MTQILAIDQG TTSTRAIVFD GQLRPKASAQ KEFTQHFPAS GWVEHDPNEI WDTVLETCRG 
ALDQGGDVAA IGITNQRETV VVWDRHTGEV VYNAIVWQDR RTADLCARLK AEGREPMIQQ
KTGLLLDPYF SGTKLAWILD NVEGARTRAE DGDLAFGTID SFLIWRMTDG QRHVTDATNA
ARTLLYNIRD GGWDPAICAM LKIPMGILPE VLDCGADFGE TSLFGAPLPI LGVAGDQQAA
TVGQACFQPG MLKSTYGTGC FALLNTGDTL VTSQNRMLGT IAYQFDGKPT YALEGSIFIA
GAVVQWLRDG LKIIDDAPQS AGLADAADAT QSLYLVPAFT GLGAPYWDPD ARGAIYGLTR
NSGPAEIAKA ALESVGFQTR DLLEAMAADY PGDTGNVRVD GGMTASDWTM QFLSDILGAP
VDRPQVLETT AVGAAWIAGN RAGLYPDQDG FAASWALDTT FEPQMDAATR DARYAGWKDA
VARTLSDHG