| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3680 |
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| Symbol | |
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| ID | 3936159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3757453 |
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| End bp | 3759066 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906057 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_511622 |
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| Protein GI | 89056171 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.979094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG TATCAGCGGA TTACGTGATT GTTGGCGCGG GCTCCGCGGG ATGCGTGCTG
GCCAACCGGC TATCGGCTGA TTCGCGAAAC TCTGTCGTTC TGCTGGAAGC GGGTGGTCGG
GACTGGAACC CATGGATCCA CATCCCCGTG GGCTATTTCA AGACGATCCA TAACCCGTCG
GTGGACTGGT GCTACAAGAC CGAGCCTGAT CCCGGCCTGA ATGGGCGGTC CATCGAATGG
CCAAGAGGCA AGGTCCTGGG GGGATCATCG TCGCTGAACG GCCTGCTCTA TGTGCGTGGA
CAAGCCCAGG ATTACGACCG CTGGCGGCAG ATGGGCAACG CGGGATGGGC GTGGGATGAT
GTGCTGCCGC TGTTCAAGCG GGCCGAGCAC AATGAGCGGG GCGCCGATGA ATTCCACGGC
GACGAAGGGC CGCTTTCGGT CTCCAACATG CGCATCCAGC GGCCCATCAC CGACGCCTGG
GTCGCGGCAG CTCAGGCGGC TGGCTATCCG TTCAACCCCG ACTACAACGG CAAAAGCCAG
GAAGGTGTGG GGTATTTTCA ACTCACCTCC CGCAACGGGC GGCGGTGCAG CTCTGCGGTG
GCTTATCTCA ACCCCGCCCG CTCCCGCGAG AACCTGCGGA TCATCACCCA CGCACAGGTC
GACCGCGTTG TCCTGGACGG CAAACGCGCC ACGGGCGTGG CCTACACGGA CCGATCCGGC
ACCCTGGTGA CGGTCAAAGC GGGCAAAGAG GTGATCCTGT GCGGCGGGGC CATCAACTCT
CCCCAATTGT TGATGACATC GGGCATTGGG GAGGCTGCGC ACCTGGCCGA ACACGGGATA
GACGTGGTCC AGGACCTGCA CGGCGTGGGC AAGAACATGC AGGACCATTT GCAGGCCCGG
CTGGTCTACA AATGCAACGA GCCGACCCTT AATGACGAGG TGTCCAGCCT TTATGGTCAG
GCGCGGATCG GGTTGAAATA CCTCATGTTC CGCGCCGGGC CGATGACCAT GGCCGCGAGC
CTTGCGACCG GGTTCATGCG TACCCGCGAC GATCTGGAAA CGCCGGACAT ACAATTCCAT
GTCCAGCCCC TTTCGGCCGA GAACCCCGGC AAGGGCGCGG ACAAGTTCAG CGCCTTCACC
ATGTCCGTGT GCCAGCTGCG CCCCGAAAGC CGGGGAGAGA TCCGCTTGGC CAGCGCCAAC
CCCCGCACCT ACCCCCGGAT CATCCCCAAT TATCTGTCGA CGGAGACCGA TTGCCGGACC
ATCGTGGCCG GGGTCAACAT CGCGCGGACC ATCGCGCGCC ATGCGCCCCT GACGTCCAAG
ATCAGCGAAG AATTCCGTCC CGACCCCAGC CTCGACATCA ACGATTACGG CGCAACGCTG
GATTGGGCCC GCAACAACAC CGCCTCGATC TATCACCCCA CCGGCACCTG CAAGATGGGC
CCGGGCCCGG ACGCGGTGGT CGATGCCCGC CTGCGCGTCC ACGGGATCAG CGGGCTGCGG
GTTGCGGATT GCTCGATCAT GCCGGAAATC GTGTCGGGCA ACACCAACGC GCCCGCGATC
ATGATTGGCG AAAAGGCCTC GGACCTGATC CTGGAAGACG CAGCGGTCGC ATAG
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| Protein sequence | MTEVSADYVI VGAGSAGCVL ANRLSADSRN SVVLLEAGGR DWNPWIHIPV GYFKTIHNPS
VDWCYKTEPD PGLNGRSIEW PRGKVLGGSS SLNGLLYVRG QAQDYDRWRQ MGNAGWAWDD
VLPLFKRAEH NERGADEFHG DEGPLSVSNM RIQRPITDAW VAAAQAAGYP FNPDYNGKSQ
EGVGYFQLTS RNGRRCSSAV AYLNPARSRE NLRIITHAQV DRVVLDGKRA TGVAYTDRSG
TLVTVKAGKE VILCGGAINS PQLLMTSGIG EAAHLAEHGI DVVQDLHGVG KNMQDHLQAR
LVYKCNEPTL NDEVSSLYGQ ARIGLKYLMF RAGPMTMAAS LATGFMRTRD DLETPDIQFH
VQPLSAENPG KGADKFSAFT MSVCQLRPES RGEIRLASAN PRTYPRIIPN YLSTETDCRT
IVAGVNIART IARHAPLTSK ISEEFRPDPS LDINDYGATL DWARNNTASI YHPTGTCKMG
PGPDAVVDAR LRVHGISGLR VADCSIMPEI VSGNTNAPAI MIGEKASDLI LEDAAVA
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