| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3678 |
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| Symbol | |
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| ID | 3936157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3755260 |
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| End bp | 3755970 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637906055 |
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| Product | TRAP dicarboxylate transporter, DctQ subunit |
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| Protein accession | YP_511620 |
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| Protein GI | 89056169 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAAA TCTTCACCGG TATGGGTGAG ATTCTTGCAG CATTCGCCGA TGGCGACAGC
TGGATGATCC GAACAGCCAT AAGCACAAAT GCAGCCTGGG TCCTGGGGCT GATCCTCATG
TTGTCGGGCG GGTTCATCGT GATGATGATC TACCGCTTCG TCCCCTTCAT CGAGCGCCAC
CTTGAATCCT ACGTCATGGT GATCTCCTAT CTCACCATCG GTGGCATCAT CTTTTTTGGC
GTGATCCAGC GTTTCGTGCC GGGGATGCTG GGCATGGACT TCTCCAACAC GCCCGCCTGG
CTCCGGCCCT GGCCGTGGAC GACGACACTT CCGCCCTTCC TGTTCCTGGT GATGACGTGG
GTGGGATGCA GCTACAACGT GAAGCTGCGC ACCCATCTGT CCTTCAGCGA ATTCCGCACC
AACATGCCAC GTCTCGCGCA GATGTTTCTG CTGAGCGTCG ATGCCATCCT GTGGATCGGC
TTTTCCTGGG TCGTGGTGGT CACGGGCACT CGGATCGCGG TCAACGCCGC ATCGAATTTC
CAGATCGTGC CGGGCACCAA TGATCTGATG CAATGGTGGT TCATCCTGGC GGTGCCGCTG
TCATTCATAT TCCTCGTCGC CCGTGCGATG GAAAACTGGC GACAGGATTT CAACAATTTC
CGCTCTGGGG ACACGATTAT CGAGCAAGCC GTGATCGGGG GTGACACATG A
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| Protein sequence | MGEIFTGMGE ILAAFADGDS WMIRTAISTN AAWVLGLILM LSGGFIVMMI YRFVPFIERH
LESYVMVISY LTIGGIIFFG VIQRFVPGML GMDFSNTPAW LRPWPWTTTL PPFLFLVMTW
VGCSYNVKLR THLSFSEFRT NMPRLAQMFL LSVDAILWIG FSWVVVVTGT RIAVNAASNF
QIVPGTNDLM QWWFILAVPL SFIFLVARAM ENWRQDFNNF RSGDTIIEQA VIGGDT
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