Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3675 |
Symbol | |
ID | 3936154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3751977 |
End bp | 3752789 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637906052 |
Product | MerR family transcriptional regulator |
Protein accession | YP_511617 |
Protein GI | 89056166 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.325472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTC CAAGACGGGC CGCAATGCGG GGTCATACGG TTAAGGAACT GGGCCAGCTC GCAGGCGTGT CCGTGCGAAC GTTGCATCAT TACGACGCGA TTGGCCTGCT CAAACCAGCC TACGTCGGAG CCAATGGCTA TCGGTATTAC GGGCGCGACG AACTGTTGCG ACTACAGGAA ATACTGGTCC TGCGCGAATT GGATATAAGC CTTTCTGACA TCGCCACGGT TCTGGCGGCA GGTCGGTCCG ACCGCGCCAG TCGCCTGGTG GCCCATCGCG ACCGGCTTGT TGCCGATGCA GAGCGCCGAA ATCGTCTGAT CGCCACGCTG GATCGCACAA TTCAACATCT CAAAGAGGAC ACACCCATGA TGACCGAAGA TCTTTATGAC GGCATATCGC CCGAGCGGCA GGAGAGCTAC GAAGCCTGGC TGATCGACCG ATACGGCAGT GATATGGCGG AGCGCATCAA GGACGCACGC GGCGAGATTG CTCCGACGTC CACGGGAATG CTCAATAGCG GAACAGACGC CATGGCAGAG CTCGCGCGGA TCGAAAGTGC ACTGGTGGCA GTGTTCCAGG ACGGCGCTGA TCCAAGCGCT GATGCCGTGG GGTCGCTCAT AGCGGATCAC CGCGATTGGG TGGCCGCCCG TTGGAAGCGC CCCTGCGATG CGGACGCCTA TGCAGGGTTG GCAGACCTCT ACCAGTCACA TCCCGATTTC GTAGCGCGGT ATGAGACTTT GGCATCTGGG TTTTCGGCGT TCCTGAACGA TGCGATGAAC GCACATGCGT GTGCCATCCG CAAAGCCGAC TAA
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Protein sequence | MKRPRRAAMR GHTVKELGQL AGVSVRTLHH YDAIGLLKPA YVGANGYRYY GRDELLRLQE ILVLRELDIS LSDIATVLAA GRSDRASRLV AHRDRLVADA ERRNRLIATL DRTIQHLKED TPMMTEDLYD GISPERQESY EAWLIDRYGS DMAERIKDAR GEIAPTSTGM LNSGTDAMAE LARIESALVA VFQDGADPSA DAVGSLIADH RDWVAARWKR PCDADAYAGL ADLYQSHPDF VARYETLASG FSAFLNDAMN AHACAIRKAD
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