Gene Jann_3675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3675 
Symbol 
ID3936154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3751977 
End bp3752789 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content59% 
IMG OID637906052 
ProductMerR family transcriptional regulator 
Protein accessionYP_511617 
Protein GI89056166 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.325472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC CAAGACGGGC CGCAATGCGG GGTCATACGG TTAAGGAACT GGGCCAGCTC 
GCAGGCGTGT CCGTGCGAAC GTTGCATCAT TACGACGCGA TTGGCCTGCT CAAACCAGCC
TACGTCGGAG CCAATGGCTA TCGGTATTAC GGGCGCGACG AACTGTTGCG ACTACAGGAA
ATACTGGTCC TGCGCGAATT GGATATAAGC CTTTCTGACA TCGCCACGGT TCTGGCGGCA
GGTCGGTCCG ACCGCGCCAG TCGCCTGGTG GCCCATCGCG ACCGGCTTGT TGCCGATGCA
GAGCGCCGAA ATCGTCTGAT CGCCACGCTG GATCGCACAA TTCAACATCT CAAAGAGGAC
ACACCCATGA TGACCGAAGA TCTTTATGAC GGCATATCGC CCGAGCGGCA GGAGAGCTAC
GAAGCCTGGC TGATCGACCG ATACGGCAGT GATATGGCGG AGCGCATCAA GGACGCACGC
GGCGAGATTG CTCCGACGTC CACGGGAATG CTCAATAGCG GAACAGACGC CATGGCAGAG
CTCGCGCGGA TCGAAAGTGC ACTGGTGGCA GTGTTCCAGG ACGGCGCTGA TCCAAGCGCT
GATGCCGTGG GGTCGCTCAT AGCGGATCAC CGCGATTGGG TGGCCGCCCG TTGGAAGCGC
CCCTGCGATG CGGACGCCTA TGCAGGGTTG GCAGACCTCT ACCAGTCACA TCCCGATTTC
GTAGCGCGGT ATGAGACTTT GGCATCTGGG TTTTCGGCGT TCCTGAACGA TGCGATGAAC
GCACATGCGT GTGCCATCCG CAAAGCCGAC TAA
 
Protein sequence
MKRPRRAAMR GHTVKELGQL AGVSVRTLHH YDAIGLLKPA YVGANGYRYY GRDELLRLQE 
ILVLRELDIS LSDIATVLAA GRSDRASRLV AHRDRLVADA ERRNRLIATL DRTIQHLKED
TPMMTEDLYD GISPERQESY EAWLIDRYGS DMAERIKDAR GEIAPTSTGM LNSGTDAMAE
LARIESALVA VFQDGADPSA DAVGSLIADH RDWVAARWKR PCDADAYAGL ADLYQSHPDF
VARYETLASG FSAFLNDAMN AHACAIRKAD