| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3654 |
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| Symbol | |
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| ID | 3936132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3727114 |
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| End bp | 3728139 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906030 |
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| Product | permease |
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| Protein accession | YP_511596 |
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| Protein GI | 89056145 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.839158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0586592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC AAACCCTTAT CCCGCGCGTC CTGCCCCAGA TCTGGGGCCG CATCGACAAG
GTCGCCCTGA CCTTCGTGCT GATCGTGGCC GTGCTGGCCG CCTTCGACCG CAGCGCTGTC
ACCCCCACTT TGCAGGAAAC GCTGGAGCAC TTTGGCGGCA CGTTGCCGTT TATCCTGTTC
GCCGTCATGG CCATCGGCGT GATGAAGGCC ACGGGGTCCG AGCGGCTTCT GGACGGCGCG
TTCGCAGGCC GCGAGGCGCG GATGATCGTG GTCGGTGCCC TCGCGGGCGG CCTTTCGCCC
TTTTGTTCCT GCGAGGTGAT CCCCTTTGTG GCAGCCCTTC TGGCCGCTGG CGCACCGCTC
AGCGCAGTTA TGGCATTCTG GCTTGCCTCG CCCCTGATGG ACCCCGCGAT GTTTGTGGTC
ACAGCGGGCG GCATCGGGTT TGACTTCGCG GTTGCGAAAA CCGTGGCCGC CGTGGCGCTT
GGCATCTTTG GCGGCGTGAT GGTGATGACC TTCGCCCGCA CGCCTGTTTT CGCCGACCCA
CTGCGCGAAC AGCCCATGAA AAGCGGATGC TGTGCGCCCA AGAAAACCAC CTTGAACTGG
CGTTTCTGGC AAGAGGCGGA CCGCCGCGCG ACATTTGCAC AGGCCGCGTG GGACAATTTC
ATCTTCCTCG GCAAATGGTT GATGCTGGCC TATCTGCTGC AATCGCTGTT GATCTCTTAC
GTGCCTGCCG CGCTGATTGC GCAGGTTGTC GGCGGCGACG GGCTGATGCC GATTATCGTC
GGTGCACTCG TGGGCGCGCC CGCCTACCTC AACGGCTACG CCGCCGTTCC GCTGATTGCG
GGTCTGCTGG AGCAGGGCAT GAGCCCCGGA GCCGCCATGT CCTTTGTCAT TGCCGGAGGC
GTCAGTTGCA TCCCCGCAGC CGTCGCCGTC TGGGCGTTGG TGAAGCCCCG TGTTTTTGCA
GCCTACCTCG GCCTCGCCCT TGCGGGTGCA ATCATTGCGG GTATGGTCTG GAGTGTGATC
GCCTAA
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| Protein sequence | MADQTLIPRV LPQIWGRIDK VALTFVLIVA VLAAFDRSAV TPTLQETLEH FGGTLPFILF
AVMAIGVMKA TGSERLLDGA FAGREARMIV VGALAGGLSP FCSCEVIPFV AALLAAGAPL
SAVMAFWLAS PLMDPAMFVV TAGGIGFDFA VAKTVAAVAL GIFGGVMVMT FARTPVFADP
LREQPMKSGC CAPKKTTLNW RFWQEADRRA TFAQAAWDNF IFLGKWLMLA YLLQSLLISY
VPAALIAQVV GGDGLMPIIV GALVGAPAYL NGYAAVPLIA GLLEQGMSPG AAMSFVIAGG
VSCIPAAVAV WALVKPRVFA AYLGLALAGA IIAGMVWSVI A
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