| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3642 |
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| Symbol | |
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| ID | 3936120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3715453 |
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| End bp | 3716112 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906018 |
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| Product | CsgA, Rossman fold oxidoreductase |
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| Protein accession | YP_511584 |
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| Protein GI | 89056133 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.14536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAATG CACTTGTGAT AGGCGCGTCG GGCGGAATCG GTGACGCAAT GGTTTCAGAG
ATGCGCGGGC GGGGCGGCAA CGTCACCGCT TTGTCGCGCA GCGCCGATGG GTTGGACGTG
ACCGATGCCG ACAGCGTGGA TCGCATTCTG GGCGGGTTGG AGCAGACATT CCAGACCGTC
TTCGTGGCCA CGGGTATTTT GGCGCCAGAC AACGGCGCGC CCGAGAAGCA GCTATCGGCG
ATTGACCCCT ATGCCATGGC CGAGGTCTTT GCAGTGAACA CCATGGGCAC AGCCAACATT
TTGCGCCACC TGCCGCGCCT TCTGCCCAAG ACAGGTCGGT CGGTCACCGC TGTGCTGACG
GCTCGCGTGG GCTCCATCGC GGACAACAGG ATCGGCGGCT GGCACAGCTA CCGGGCCTCC
AAGGCGGCGG CTAACATGCT GATCCGCGGC GCTGCGATTG AGCTTGCCCG CACCCACAAG
AACGCCCTTG TCACCGCGAT GCATCCCGGC ACTGTGGCCA CGCCGTTCAC CGCAGATTAC
GCGGGCGGCC ATAAAACTGT CCCTGCCGAT GAGACGGCGG CAATGCTCTG CGATGTGATG
GAGCGGTTGG AGACGACGGG CACCTTTGTC GACTACTCCG GCGCGACGGT GCCTTGGTGA
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| Protein sequence | MINALVIGAS GGIGDAMVSE MRGRGGNVTA LSRSADGLDV TDADSVDRIL GGLEQTFQTV
FVATGILAPD NGAPEKQLSA IDPYAMAEVF AVNTMGTANI LRHLPRLLPK TGRSVTAVLT
ARVGSIADNR IGGWHSYRAS KAAANMLIRG AAIELARTHK NALVTAMHPG TVATPFTADY
AGGHKTVPAD ETAAMLCDVM ERLETTGTFV DYSGATVPW
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