| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3634 |
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| Symbol | |
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| ID | 3936112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3707599 |
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| End bp | 3708990 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637906010 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_511576 |
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| Protein GI | 89056125 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0948956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACT CGCAAGCGGT CTTTCTTGAA GGCTCCCTCT TCAAGCACAT AACGGTCATG
TCCCTGACCT CCTCGGTCGG ATTGATGGCG GTGTTCCTGG TGGACTTCGT CGACATGATC
TTCATCTCCA TGCTGGGGAA GGAGGAGCTG GCGGCAGCCA TTGGATATGC AGGCGCGATC
CTGTTCTTCA CCTCGTCGTT CGGCATTGGC ATGGCGATTG CAGGGGGCGC ATTGGTGGCG
CGGGCCCTTG GCGCGGGCGA TGAGGCGCTG GCCCGTCGTC GCGCGGGCAC GACGCTATTT
TACGGCGTGC TGATCGGGAG CCTGTTTTCG GCACTCGTCT GGGTGAACCT TCCGACACTC
GTGGCGCTGT TGGGGGCCAG CGATGCCACG CAGGACCTTG CGGTGGGATA CTTGCGGATC
ATCATACCCT CCCTCCCGCT GCTCTTGGTG GGTATGGTCG GTGGCGCGAT CCTGCGCGCC
CATGGCGATG CGCGCCGTGC CATGATGGCC ACGATCATCG GCGGGTTGGT GAATGCCGTC
CTCGATCCAA TCCTGATCTT CGGCCTCAAC CTGGAGCTGA CGGGGGCCGC GATCGCCTCC
GTCTGCGCGC GCGTCGCGAT TGCCGCCGTC GCCTTGATCC CGATCTTCCG GCACCATGGT
GGCCTGGCGC GTCCGTCCCT GCCGGACCTT CGGCTGGATT TGTCGCCGAT CCTTGCGCTG
GCGGCGCCTG CGATCCTGAC GCAGCTGGCC ACGCCCGTGG GGCAGGCCAT CGTCACCCGC
TCCATGGCGC AATATGGCGA AGACGCCGTG GCCGGTATGG CCATCATCGG CCGCCTGACG
CCAGTGGCTT TCGGTGTCCT CTTCGCGCTG TCCGGGGCCG TGGGGCCCAT CGTGGGGCAG
AACTTCGGCG CCGGAAAACA GGAGCGGGTC AAGCGCACCT ATGTTGAGGC AATGGCCTTC
ACGGCCCTTG TTGTCCTCGT TGTCAGCGCC GTGCTGTTCT TCCTGCGCGA GCCCATTGTC
GCGCTCTTCT CCGCGACGGG GGAGGCGCGG TCGCTGGTCT TCCTGTTCTG CGGGCCCCTG
GCGCTCGCGT TCTTTTTCAA CGGGATGATC TTCGTGTCCA ACGCCAGCCT CAACAATATC
GGCTATCCCT ATACCTCAAC CTGGGTGAAC TGGGGGCGTC ACACGCTTGG CACCATCTTG
CCAATCCTCG CCTTCTCGGC ATGGCTGGGG GCGGAAGGCG TGCTGATCGG GCAGGCCTTC
GGCGGCATCG TGTTCGGTCT CCTGTCATTC GTTCTGGTGC GCCGGATCAT GGCGATAGCC
ACGGACGCCC CGACGCAGGA GCCGTTCGCC CGCCATGCAC GTCTGATGGC GCTGTTTCAC
CGGCACCGCT GA
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| Protein sequence | MANSQAVFLE GSLFKHITVM SLTSSVGLMA VFLVDFVDMI FISMLGKEEL AAAIGYAGAI
LFFTSSFGIG MAIAGGALVA RALGAGDEAL ARRRAGTTLF YGVLIGSLFS ALVWVNLPTL
VALLGASDAT QDLAVGYLRI IIPSLPLLLV GMVGGAILRA HGDARRAMMA TIIGGLVNAV
LDPILIFGLN LELTGAAIAS VCARVAIAAV ALIPIFRHHG GLARPSLPDL RLDLSPILAL
AAPAILTQLA TPVGQAIVTR SMAQYGEDAV AGMAIIGRLT PVAFGVLFAL SGAVGPIVGQ
NFGAGKQERV KRTYVEAMAF TALVVLVVSA VLFFLREPIV ALFSATGEAR SLVFLFCGPL
ALAFFFNGMI FVSNASLNNI GYPYTSTWVN WGRHTLGTIL PILAFSAWLG AEGVLIGQAF
GGIVFGLLSF VLVRRIMAIA TDAPTQEPFA RHARLMALFH RHR
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