| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3625 |
|---|
| Symbol | |
|---|
| ID | 3936103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3698532 |
|---|
| End bp | 3698738 |
|---|
| Gene Length | 207 bp |
|---|
| Protein Length | 68 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637906001 |
|---|
| Product | cold-shock DNA-binding protein family protein |
|---|
| Protein accession | YP_511567 |
|---|
| Protein GI | 89056116 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.164813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0835288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATG GCACCGTGAA ATGGTTCAAC TCTACTAAAG GCTTCGGCTT TATCGCACCC
GAGACGGGCG GCAAGGACGT GTTTGTGCAC ATCTCTGCTG TTGAGCGCTC TGGTTTGACC
GGCCTCGCCG ACAACCAGAA GGTGACCTAC GACCTCGAAG CTGGCCGTGA CGGTCGCGAG
AGCGCAGTGA ACCTGAAGGC CGTCTGA
|
|---|
| Protein sequence | MANGTVKWFN STKGFGFIAP ETGGKDVFVH ISAVERSGLT GLADNQKVTY DLEAGRDGRE
SAVNLKAV
|
|---|
| |