| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3622 |
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| Symbol | |
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| ID | 3936100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3693815 |
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| End bp | 3696646 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637905998 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_511564 |
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| Protein GI | 89056113 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.290063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0837915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTGGA CGACCACCGA CTACGATCCC ACCGATTTCG CCAACCGCCG CCATATCGGC
CCGTCCCCCG CCGAGATGGC GGAGATGCTG GAATTCGTCG GCGCGGACAG CCTTGATGCG
CTGATCGACG ACACCGTCCC GGCCTCTATC CGGCAGGCAG GCGCGCTAGA CTGGGCGGCG
ATGTCAGAGG CCGAGCTGCT GGATCACATG CGGGCCATTG CGGACAAGAA CAAGCCCATG
GTCTCGATGA TCGGTCAGGG GTATTTCGGC ACCCATACGC CGCCCGCGAT CCAGCGTAAC
GTGCTGGAGA ACCCGGCGTG GTACACGGCC TACACTCCGT ATCAGCCCGA AATCGCACAG
GGGCGGCTGG AGGCGCTCCT GAACTTCCAG ACCATGGTGG CGGACCTGAC GGGTCTGCCG
GTGGCCAATG CCTCGCTGCT GGATGAGGCG ACGGCGGCTG CCGAAGCGAT GGTCATGGCG
CAGCGTGCCT CCAAATCCAA GGCGCGGACG TTTTTCGTGG ACGAGACCTG CCACCCCCAA
ACAATCGCCG TGATCCAGAC CCGGGCCGAG CCTTTGGGCA TTGAGGTTCG TGTGGGTGAT
GCAGCCATGC TGGACGCCGA CGCCGTGTTT GGCGCAATCT TCCAGTATCC GTGCACGTTT
GGGGGCCTGC GCGACCCCTC GGCCCAGATC GAGGCGTTGC ACGAGGCCAA GGCCATCGCG
GTCGTGGCGA CGGACCTCCT GGCGCTGACC GTCCTGAAGG AACCCGGTGC CATGGGCGCG
GATATCGCCG TGGGATCCGC GCAACGCTTC GGCGTGCCTT TGGGATATGG CGGCCCCCAC
GCCGCGTTCA TGTCTTGCCG TGACGCGCTG AAACGCTCTC TGCCCGGGCG CATCGTGGGC
GTCTCTGTTG ATAGCCATGG TCAGAACGCT TACCGCCTGT CGCTGCAAAC GCGCGAACAG
CACATCCGCC GCGAAAAGGC GACATCGAAC GTCTGCACAG CCCAGGCCTT GCTCGCCGTC
ATGGCCAGCT TCTACGCGGT TTTCCACGGC CCCAAAGGCC TGCGGGCCAT CGCGGAGCGG
GTTCACATGC GCGCCGTCCG CCTTGCGGCG TCACTGTCGG CGGGGGGCTT TGCGCCGGAC
AACGACACGT TTTTCGACAC GCTCACCGTG CATGTGGGCG ACAAGCAATC GCGCATCATG
GCCGCCGCCG TGGCCCGCGG GATCAACCTG CGCGATGTGG GCGCGGACCG CATCGGGATC
TCTGTCGATG AGGTCACGAC CGACGCTCAT ATCGAGGCCG TCTGCCGTGC CTTCGGGGTC
CTCAAGGCCC CGGCTCCAAA AGCGCCTGCG ATCTCCGATG ACCTGCTGCG CATGTCGGAT
TACCTGACCC ATCCGATCTT CCACATGAAC CGCGCGGAAT CCGAGATGAT GCGCTACATG
CGTCGCCTGT CGGACCGCGA CCTGGCGCTG GACCGCGCGA TGATCCCCCT GGGCTCCTGC
ACCATGAAGC TGAATGCGGC GGTGGAGATG ATGCCCATCA CCTGGCCCGA ATTTGGCAAC
CTGCATCCCT TCGCGCCCGC CGATCAGGCG GAAGGCTACG CCGAAATGCT GGAAGACCTC
TCTGCCAAGC TCTGCGACAT CACCGGCTAT GACGCGATGT CGATGCAGCC GAACTCGGGC
GCGCAGGGCG AATACGCAGG CCTCCTGACG ATTGCCGCCT ATCATCGCGC GCGCGGGGAG
ACGCGTAACA TCTGTCTGAT CCCCGTCTCG GCCCATGGCA CCAACCCGGC CTCCGCCCAG
ATGGCGGGCA TGCAGGTCGT CGTGGTGAAA TCCCAAGAGG ACGGCGATAT CGATCTGGTC
GATTTCCGTG CCAAGGCCGA GGCGGCGGGC GACAAGCTGG CGGCCTGCAT GATCACCTAC
CCCTCCACCC ACGGCGTGTT CGAGGAAAGC GTGCGGGAGG TTTGCGAGAT CACCCATGAA
TTAGGTGGGC AGGTGTATCT GGATGGCGCG AACCTCAACG CCATGGTGGG GCTGTCGAAG
CCGGGCGAAT TGGGCGCGGA TGTCAGCCAC CTGAACCTGC ACAAGACCTT CTGCATCCCC
CACGGCGGCG GCGGTCCGGG CATGGGACCG ATCGGCGTAA AGGCACACCT CGCGCCACAT
CTTCCGGGCC ATCCAGAGAC TGGCGGTACG CAGGGTCCGG TCTCTGCCGC GCCCTATGGC
TCAGCCTCAA TCCTGCCGAT TTCCTATGCC TACGTGCACC TCATGGGCGG CTCCGGCCTG
ACCCAGGCGA CCAAGGTCGC GATCCTCGGC GCCAACTACA TCGCCAAGCG GTTGGAGGGA
GATTACGGCG TCCTTTTCAA AGGCAAGACC GGGCGCGTCG CCCATGAATG TATCCTCGAC
ACCCGCCCCT TCGCCGAGGC CGGGATTACC GTTGACGATA TCGCGAAACG ACTGATGGAT
CACGGCTTCC ACGCGCCCAC AATGAGCTGG CCCGTGGCGG GCACCCTGAT GGTGGAGCCC
ACGGAGTCGG AGACAAAGGC CGAACTTGAC CGCTTCATCA CCGCAATGCA GGCGATCCGG
GCCGAGATTG CCGAGGTAGA GGACGGTTTG CCCGCAGGCG ACAGCCCCCT GCACCACGCA
CCCCACACGA TGGAGGATCT GGTGCGCGAC TGGGACCGGG CCTACACCCG GGAACAGGGT
TGCTTCCCGC CGGGCGCGTT CCGCGTCGAC AAATACTGGC CACCCGTGAA CCGCGTGGAC
AATGTGGCGG GCGACCGAAA CCTGATCTGC ACCTGCCCAC CGTTGGAGGA ATATCTGGAC
GCTGCCGAGT GA
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| Protein sequence | MPWTTTDYDP TDFANRRHIG PSPAEMAEML EFVGADSLDA LIDDTVPASI RQAGALDWAA
MSEAELLDHM RAIADKNKPM VSMIGQGYFG THTPPAIQRN VLENPAWYTA YTPYQPEIAQ
GRLEALLNFQ TMVADLTGLP VANASLLDEA TAAAEAMVMA QRASKSKART FFVDETCHPQ
TIAVIQTRAE PLGIEVRVGD AAMLDADAVF GAIFQYPCTF GGLRDPSAQI EALHEAKAIA
VVATDLLALT VLKEPGAMGA DIAVGSAQRF GVPLGYGGPH AAFMSCRDAL KRSLPGRIVG
VSVDSHGQNA YRLSLQTREQ HIRREKATSN VCTAQALLAV MASFYAVFHG PKGLRAIAER
VHMRAVRLAA SLSAGGFAPD NDTFFDTLTV HVGDKQSRIM AAAVARGINL RDVGADRIGI
SVDEVTTDAH IEAVCRAFGV LKAPAPKAPA ISDDLLRMSD YLTHPIFHMN RAESEMMRYM
RRLSDRDLAL DRAMIPLGSC TMKLNAAVEM MPITWPEFGN LHPFAPADQA EGYAEMLEDL
SAKLCDITGY DAMSMQPNSG AQGEYAGLLT IAAYHRARGE TRNICLIPVS AHGTNPASAQ
MAGMQVVVVK SQEDGDIDLV DFRAKAEAAG DKLAACMITY PSTHGVFEES VREVCEITHE
LGGQVYLDGA NLNAMVGLSK PGELGADVSH LNLHKTFCIP HGGGGPGMGP IGVKAHLAPH
LPGHPETGGT QGPVSAAPYG SASILPISYA YVHLMGGSGL TQATKVAILG ANYIAKRLEG
DYGVLFKGKT GRVAHECILD TRPFAEAGIT VDDIAKRLMD HGFHAPTMSW PVAGTLMVEP
TESETKAELD RFITAMQAIR AEIAEVEDGL PAGDSPLHHA PHTMEDLVRD WDRAYTREQG
CFPPGAFRVD KYWPPVNRVD NVAGDRNLIC TCPPLEEYLD AAE
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