| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3602 |
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| Symbol | |
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| ID | 3936078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3678087 |
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| End bp | 3680282 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905978 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_511544 |
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| Protein GI | 89056093 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.510357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.935221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACA ATTCGCCCGA ACAGATGCCT GACACGGGCC GCGCCGTGGA CGCGCTGCGC
GCACAATTGA AAATGGAGGG TGGCAAAGCC TTTGTCCTCC AGACCGAGTT TGAACCGGCA
GGCGATCAGC CCACCGCAAT CGCAGAATTG TCCGAGGGGA TTCGCGAGGG TGAACGGGAC
CAGGTGCTCC TTGGCGCAAC GGGAACTGGT AAGACCTTCA CCATGGCAAA GATGATTGAG
GAAACGCAGC GCCCCGCCAT CATTCTTGCG CCCAACAAGA CGTTGGCCGC GCAGCTTTAT
GCGGAGTTCA AGAACTTCTT CCCGGAAAAC GCCGTCGAAT ACTTCGTCAG CTACTACGAC
TATTATCAGC CCGAGGCCTA TGTGGCGCGG TCCGACACCT ACATCGAGAA AGAAAGCCAG
ATCAACGAAC AGATCGACCG CATGCGCCAC TCGGCCACGC GGGCCCTGTT GGAACGGGAC
GACGTTATCA TCGTGGCATC CGTGTCGTGT ATCTACGGCA TCGGCAGCGT GGAAACCTAC
GGTGCGATGA CCCAGGATCT GCACGCAGGC CGGGAATATG ACCAACGCAA GGTCATCGCC
GATCTGGTGG CGCAGCAATA TCGCCGCAAC GACGCCGCCT TTCAGCGGGG GTGTTTCCGC
GTGCGCGGTG ACAGTCTGGA AGTCTGGCCC GCCCACTTGG ATGATCGCGC CTGGAAGCTG
TCGTTTTTTG GGGAAGAGCT GGAAAGCATC ACCGAATTCG ACCCCCTGAC CGGTCAGAAG
ACGGACACGT TCGAGAAGAT CCGCGTCTAC GCGAATTCCC ACTACGTCAC GCCGCGCCCC
ACGATGCAGC AGGCCATGAA GGGCATTAAG TCTGAGCTGG CGATGCGCCT GAAACAGATG
ATTGACGAGG GCAAGCTGCT GGAGGCCCAG CGGCTGGAAC AACGCACCAA CTTCGATCTG
GAGATGCTGG AAGCCACCGG CGTCTGCAAC GGGATCGAGA ACTACTCCCG CTATCTGACG
GGCCGCGCGC CGGGTGAACC GCCCCCCACC CTGTTCGAAT ACATCCCCGA TAATGCGATT
GTTTTCGCCG ACGAAAGCCA TGTTTCCGTG CCGCAGATCG GCGGGATGTA CCGCGGCGAC
TACCGGCGCA AATTCACGCT GGCAGAACAC GGCTTCCGCC TGCCCTCCTG CATGGACAAC
CGCCCCCTGA AGTTTGAGGA ATGGGACGCC ATGCGGCCGC AATCCGTCTT CGTATCCGCC
ACACCCGCCG CGTGGGAGTT GGAGCAGGCG GGCGGCGTTT TCACCGAACA GGTCATTCGC
CCAACAGGCC TGATCGACCC GCAGATCGAG ATCCGACCGG TGGATATGCA GGTCGATGAT
CTGCTGGATG AGGTCCGCAA AGTGGCCGCC GATGGTTATC GCACGCTGGT CACGACGCTC
ACCAAGCGCA TGGCCGAAGA TCTGACGGAA TACATGCACG AACAGGGCAT CCGCGTGCGC
TACATGCACT CGGATATCGA CACACTGGAA CGGATCGAAA TCCTGCGCGA CCTGCGGTTG
GGCGCGTTTG ACGTGCTGAT CGGGATCAAC CTGCTGCGCG AGGGTCTCGA CATTCCGGAA
TGCGGGTTGG TGGCCATTCT GGATGCCGAC AAGGAAGGCT TTTTGCGGTC CGAGACGTCC
CTGATTCAGA CCATTGGGCG GGCCGCGCGC AACGCCGACG GTCGCGTGAT CATGTATGCG
GACAAGATCA CCGGCTCCAT GGAGCGCGCC ATGCGCGAGA CCGAGCGGAG ACGGGTCAAG
CAGTTGGCGT ATAACGAAGA ACACGGCATC ACGCCCGCAA CGATCAAGAA GAATGTCGAT
GACATCCTGA TGGGCGTCTA CCAGGGTGAC ACCGACCAAA GCCGCGTCAC GGCCAAGGTC
GACAAACCGC TTGTGGGCGC GAACCTTGCG GCGCATCTCG ACGGCCTGCG CGACAAGATG
CGCAAGGCGG CGGAGAACCT GGAGTTTGAG GAAGCTGCGC GCCTGCGTGA TGAGGTCAAG
CGGTTGGAGA CGGTGGAACT GGCCATCGCC GACGACCCGC TGGCCCGCCA GTCAGCGGTG
GAGGCGGCGG TGGAAGATGC GTCAAAGGCC AGCGGCCGGT CAACGGCAGG TCGGGGCGGT
CAACGGGGTG GGAACGTCAA GCGGCGGAAG CGGTAG
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| Protein sequence | MHNNSPEQMP DTGRAVDALR AQLKMEGGKA FVLQTEFEPA GDQPTAIAEL SEGIREGERD
QVLLGATGTG KTFTMAKMIE ETQRPAIILA PNKTLAAQLY AEFKNFFPEN AVEYFVSYYD
YYQPEAYVAR SDTYIEKESQ INEQIDRMRH SATRALLERD DVIIVASVSC IYGIGSVETY
GAMTQDLHAG REYDQRKVIA DLVAQQYRRN DAAFQRGCFR VRGDSLEVWP AHLDDRAWKL
SFFGEELESI TEFDPLTGQK TDTFEKIRVY ANSHYVTPRP TMQQAMKGIK SELAMRLKQM
IDEGKLLEAQ RLEQRTNFDL EMLEATGVCN GIENYSRYLT GRAPGEPPPT LFEYIPDNAI
VFADESHVSV PQIGGMYRGD YRRKFTLAEH GFRLPSCMDN RPLKFEEWDA MRPQSVFVSA
TPAAWELEQA GGVFTEQVIR PTGLIDPQIE IRPVDMQVDD LLDEVRKVAA DGYRTLVTTL
TKRMAEDLTE YMHEQGIRVR YMHSDIDTLE RIEILRDLRL GAFDVLIGIN LLREGLDIPE
CGLVAILDAD KEGFLRSETS LIQTIGRAAR NADGRVIMYA DKITGSMERA MRETERRRVK
QLAYNEEHGI TPATIKKNVD DILMGVYQGD TDQSRVTAKV DKPLVGANLA AHLDGLRDKM
RKAAENLEFE EAARLRDEVK RLETVELAIA DDPLARQSAV EAAVEDASKA SGRSTAGRGG
QRGGNVKRRK R
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